| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g21442 | 11:685,695-686,040 | + | C1H12g13992 | - | LOC_Os12g02380 | Os11g0116400 | - | Detail |
| C2H11g20016 | 11:686,370-688,199 | + | C1H11g02295 | CX12g018356 | LOC_Os12g02380 | Os11g0116400 | - | Detail |
| C2H11g19381 | 11:686,889-691,961 | - | C1H11g01957 | CX11g013702 | LOC_Os12g02385 | Os11g0116500 | - | Detail |
| C2H11g03044 | 11:692,058-696,590 | - | C1H11g01957 | CX11g012819 | LOC_Os12g02390 | Os11g0116550 | OsVSR3 | Detail |
| C2H11g04265 | 11:698,295-699,588 | - | C1H11g18757 | CX11g012017 | LOC_Os12g02400 | Os12g0116100 | OsWRKY114 | Detail |
| C2H11g05407 | 11:708,771-712,182 | - | C1H12g19347 | CX11g012017 | LOC_Os12g02420 | Os11g0116900 | OsWRKY46 | Detail |
| C2H11g18418 | 11:736,087-737,322 | - | C1H11g22300 | CX11g012017 | LOC_Os12g02450 | Os11g0117500 | - | Detail |
| C2H11g25113 | 11:745,040-746,561 | - | C1H12g31265 | CX11g014260 | LOC_Os12g02470 | Os11g0117600 | OsWRKY50 | Detail |
| C2H11g04264 | 11:751,473-755,739 | - | C1H11g28265 | CX11g011584 | LOC_Os12g02490 | Os11g0117700 | - | Detail |
| C2H11g24535 | 11:759,891-761,032 | + | C1H11g23952 | CX11g013876 | LOC_Os12g02500 | Os11g0117900 | - | Detail |
| C2H11g14396 | 11:764,426-765,792 | - | C1H12g13059 | CX11g011355 | LOC_Os12g02520 | Os11g0118200 | - | Detail |
| C2H11g25137 | 11:766,363-768,647 | - | C1H11g00384 | CX11g014989 | LOC_Os12g02530 | Os11g0118300 | - | Detail |
| C2H11g22359 | 11:770,524-775,003 | - | C1H11g29966 | CX11g014929 | LOC_Os12g02540 | Os11g0118500 | - | Detail |
| C2H11g07467 | 11:793,521-794,004 | - | - | CX11g014866 | - | - | - | Detail |
| C2H11g03806 | 11:793,615-797,355 | + | C1H11g18128 | CX11g014991 | LOC_Os12g02589 | Os11g0119100 | - | Detail |
| C2H11g26784 | 11:799,200-804,432 | + | C1H11g22719 | CX11g013596 | LOC_Os12g02630 | Os11g0119200 | - | Detail |
| C2H11g27402 | 11:811,419-811,637 | - | C1H11g31503 | - | LOC_Os07g35500 | Os07g0539200 | - | Detail |
| C2H11g20690 | 11:811,664-812,580 | - | - | - | - | - | - | Detail |
| C2H11g28825 | 11:822,804-826,403 | - | C1H11g18218 | CX11g013237 | - | - | - | Detail |
| C2H11g22132 | 11:826,772-834,508 | + | C1H11g01198 | CX11g012225 | LOC_Os12g02690 | Os11g0119900 | OsDRB1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002839 | 1:7,965,003-7,968,083 | + | C1H10g06964 | C2H1g07347 | LOC_Os01g15860 | Os01g0263600 | - | Detail |
| CX1g006868 | 1:7,988,614-7,991,522 | - | C1H1g18015 | C2H1g18028 | LOC_Os01g15900 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |
| CX1g002913 | 1:7,994,733-7,994,882 | - | - | - | - | - | - | Detail |
| CX1g003610 | 1:8,020,520-8,021,287 | + | C1H1g15752 | C2H1g18875 | LOC_Os01g15970 | Os01g0264400 | - | Detail |
| CX1g005560 | 1:8,023,122-8,025,944 | + | C1H1g22583 | C2H1g29970 | LOC_Os01g15979 | Os01g0264500 | - | Detail |
| CX1g004846 | 1:8,028,267-8,029,871 | + | C1H1g22583 | C2H1g16351 | LOC_Os01g15990 | Os01g0264600 | - | Detail |
| CX1g003410 | 1:8,035,611-8,038,000 | - | C1H1g00764 | C2H1g04930 | LOC_Os01g16000 | Os01g0264700 | OsSec14-1 | Detail |
| CX1g006955 | 1:8,045,658-8,048,888 | + | C1H1g30463 | C2H1g18047 | LOC_Os01g16010 | Os01g0264900 | - | Detail |
| CX1g002598 | 1:8,051,182-8,052,549 | + | - | C2H1g05764 | LOC_Os01g16020 | Os01g0265000 | OsGGR2, LYL2, OsGGRII | Detail |
| CX1g006039 | 1:8,053,095-8,055,662 | - | C1H1g31421 | C2H1g10976 | LOC_Os01g16030 | Os01g0265100 | - | Detail |
| CX1g005747 | 1:8,058,574-8,061,692 | - | C1H1g11286 | C2H1g02114 | LOC_Os01g16040 | Os01g0265200 | OsPAPST1 | Detail |
| CX1g007112 | 1:8,070,569-8,070,853 | - | - | C2H1g11487 | - | - | - | Detail |
| CX1g002223 | 1:8,071,090-8,072,410 | - | - | C2H1g21228 | - | Os01g0265400 | - | Detail |
| CX1g003650 | 1:8,073,377-8,073,703 | - | C1H1g29094 | - | - | - | - | Detail |
| CX1g004697 | 1:8,084,310-8,086,992 | - | C1H1g21127 | C2H1g27693 | LOC_Os01g16080 | Os01g0265700 | - | Detail |
| CX1g004489 | 1:8,087,375-8,087,590 | + | - | - | - | - | - | Detail |
| CX1g000499 | 1:8,091,264-8,092,739 | - | - | C2H1g00739 | LOC_Os01g16090 | Os01g0265800 | - | Detail |
| CX1g001659 | 1:8,094,340-8,097,863 | - | C1H1g27759 | C2H1g10672 | LOC_Os01g16100 | Os01g0265900 | - | Detail |
| CX1g000998 | 1:8,109,159-8,117,754 | + | C1H1g07258 | C2H1g01396 | LOC_Os01g16110 | Os01g0266000 | - | Detail |
| CX1g004062 | 1:8,125,683-8,126,279 | + | C1H1g24050 | C2H1g23893 | LOC_Os01g16120 | Os01g0266100 | - | Detail |