| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g10731 | 9:12,950,090-12,952,377 | + | C1H9g00425 | CX9g057342 | LOC_Os09g25610 | Os09g0424200 | - | Detail |
| C2H9g23538 | 9:12,953,901-12,957,395 | - | C1H9g11995 | CX9g056823 | LOC_Os09g25620 | Os09g0424300 | - | Detail |
| C2H9g21679 | 9:12,964,964-12,966,064 | + | C1H9g23061 | CX9g057732 | - | - | - | Detail |
| C2H9g08773 | 9:12,968,133-12,968,381 | + | C1H9g16841 | - | - | Os09g0424501 | - | Detail |
| C2H9g17706 | 9:12,968,447-12,974,106 | + | C1H9g06900 | CX9g055223 | LOC_Os09g25640 | Os09g0424600 | - | Detail |
| C2H9g22032 | 9:12,975,485-12,984,238 | - | C1H9g10976 | CX9g054887 | LOC_Os09g25650 | Os09g0424701 | - | Detail |
| C2H9g24145 | 9:13,000,029-13,001,366 | - | C1H9g18355 | - | - | - | - | Detail |
| C2H9g19428 | 9:13,004,618-13,007,372 | + | C1H9g28855 | CX9g055237 | LOC_Os09g25760 | Os09g0425900 | OsTET13 | Detail |
| C2H9g10867 | 9:13,009,227-13,011,073 | - | C1H9g03184 | CX9g055664 | LOC_Os09g25770 | Os09g0426000 | - | Detail |
| C2H9g00227 | 9:13,011,753-13,016,435 | - | C1H9g11252 | CX9g057872 | LOC_Os09g25784 | Os09g0426100 | - | Detail |
| C2H9g10149 | 9:13,021,345-13,025,911 | - | C1H9g20388 | CX9g055177 | LOC_Os09g25810 | Os09g0426500 | - | Detail |
| C2H9g14453 | 9:13,046,445-13,051,598 | + | C1H9g07571 | CX9g056946 | LOC_Os09g25850 | Os09g0426800 | WSL2, OsGL1-1 | Detail |
| C2H9g25512 | 9:13,070,815-13,073,667 | + | C1H9g21647 | CX9g056367 | LOC_Os09g25890 | Os09g0427800 | - | Detail |
| C2H9g23436 | 9:13,085,744-13,088,896 | - | C1H9g06592 | CX9g057126 | LOC_Os09g25900 | Os09g0428000 | OsCSLC2 | Detail |
| C2H9g09090 | 9:13,103,143-13,107,909 | - | C1H9g21920 | CX9g057147 | LOC_Os09g25960 | Os09g0428300 | - | Detail |
| C2H9g03164 | 9:13,114,372-13,120,984 | - | C1H9g07601 | CX9g057147 | LOC_Os09g25980 | Os09g0428600 | - | Detail |
| C2H9g20059 | 9:13,124,323-13,127,470 | + | C1H9g14445 | - | LOC_Os09g25950 | Os09g0428900 | - | Detail |
| C2H9g24731 | 9:13,129,491-13,135,553 | - | C1H9g28274 | CX9g057147 | LOC_Os09g25960 | Os09g0429000 | - | Detail |
| C2H9g22878 | 9:13,141,320-13,141,968 | + | C1H9g10048 | - | LOC_Os09g25970 | Os09g0429100 | - | Detail |
| C2H9g26261 | 9:13,142,498-13,149,985 | - | C1H9g18274 | CX9g057147 | LOC_Os09g25980 | Os09g0429200 | OsGLR2.1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002839 | 1:7,965,003-7,968,083 | + | C1H10g06964 | C2H1g07347 | LOC_Os01g15860 | Os01g0263600 | - | Detail |
| CX1g006868 | 1:7,988,614-7,991,522 | - | C1H1g18015 | C2H1g18028 | LOC_Os01g15900 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |
| CX1g002913 | 1:7,994,733-7,994,882 | - | - | - | - | - | - | Detail |
| CX1g003610 | 1:8,020,520-8,021,287 | + | C1H1g15752 | C2H1g18875 | LOC_Os01g15970 | Os01g0264400 | - | Detail |
| CX1g005560 | 1:8,023,122-8,025,944 | + | C1H1g22583 | C2H1g29970 | LOC_Os01g15979 | Os01g0264500 | - | Detail |
| CX1g004846 | 1:8,028,267-8,029,871 | + | C1H1g22583 | C2H1g16351 | LOC_Os01g15990 | Os01g0264600 | - | Detail |
| CX1g003410 | 1:8,035,611-8,038,000 | - | C1H1g00764 | C2H1g04930 | LOC_Os01g16000 | Os01g0264700 | OsSec14-1 | Detail |
| CX1g006955 | 1:8,045,658-8,048,888 | + | C1H1g30463 | C2H1g18047 | LOC_Os01g16010 | Os01g0264900 | - | Detail |
| CX1g002598 | 1:8,051,182-8,052,549 | + | - | C2H1g05764 | LOC_Os01g16020 | Os01g0265000 | OsGGR2, LYL2, OsGGRII | Detail |
| CX1g006039 | 1:8,053,095-8,055,662 | - | C1H1g31421 | C2H1g10976 | LOC_Os01g16030 | Os01g0265100 | - | Detail |
| CX1g005747 | 1:8,058,574-8,061,692 | - | C1H1g11286 | C2H1g02114 | LOC_Os01g16040 | Os01g0265200 | OsPAPST1 | Detail |
| CX1g007112 | 1:8,070,569-8,070,853 | - | - | C2H1g11487 | - | - | - | Detail |
| CX1g002223 | 1:8,071,090-8,072,410 | - | - | C2H1g21228 | - | Os01g0265400 | - | Detail |
| CX1g003650 | 1:8,073,377-8,073,703 | - | C1H1g29094 | - | - | - | - | Detail |
| CX1g004697 | 1:8,084,310-8,086,992 | - | C1H1g21127 | C2H1g27693 | LOC_Os01g16080 | Os01g0265700 | - | Detail |
| CX1g004489 | 1:8,087,375-8,087,590 | + | - | - | - | - | - | Detail |
| CX1g000499 | 1:8,091,264-8,092,739 | - | - | C2H1g00739 | LOC_Os01g16090 | Os01g0265800 | - | Detail |
| CX1g001659 | 1:8,094,340-8,097,863 | - | C1H1g27759 | C2H1g10672 | LOC_Os01g16100 | Os01g0265900 | - | Detail |
| CX1g000998 | 1:8,109,159-8,117,754 | + | C1H1g07258 | C2H1g01396 | LOC_Os01g16110 | Os01g0266000 | - | Detail |
| CX1g004062 | 1:8,125,683-8,126,279 | + | C1H1g24050 | C2H1g23893 | LOC_Os01g16120 | Os01g0266100 | - | Detail |