| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01001 | 1:31,157,215-31,157,939 | + | C1H1g09909 | CX1g001859 | LOC_Os01g60790 | Os01g0823300 | - | Detail |
| C2H1g22329 | 1:31,159,852-31,162,197 | + | C1H1g09299 | CX1g000409 | LOC_Os01g60800 | Os01g0823400 | - | Detail |
| C2H1g28368 | 1:31,180,789-31,181,596 | + | C1H1g15235 | CX1g000050 | LOC_Os01g60830 | Os01g0823600 | - | Detail |
| C2H1g25336 | 1:31,181,978-31,183,291 | - | C1H1g00815 | CX1g001515 | LOC_Os01g60850 | Os01g0823700 | - | Detail |
| C2H1g15724 | 1:31,191,780-31,193,289 | + | - | - | - | - | - | Detail |
| C2H1g17727 | 1:31,216,032-31,217,464 | + | C1H1g23645 | CX1g003469 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| C2H1g23198 | 1:31,226,073-31,227,086 | + | C1H1g13975 | - | - | - | - | Detail |
| C2H1g16723 | 1:31,235,133-31,236,592 | + | C1H1g11676 | CX1g003180 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| C2H1g02718 | 1:31,239,270-31,242,043 | + | C1H1g20864 | CX1g006995 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| C2H1g11166 | 1:31,249,117-31,250,593 | + | C1H1g30844 | CX1g007134 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| C2H1g11491 | 1:31,269,900-31,272,168 | - | C1H1g30975 | CX1g003391 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| C2H1g13725 | 1:31,280,969-31,285,288 | - | C1H1g04795 | CX1g004445 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| C2H1g15106 | 1:31,287,231-31,292,994 | - | C1H1g30003 | CX1g002793 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| C2H1g08505 | 1:31,295,057-31,297,524 | + | C1H1g18090 | CX1g003706 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| C2H1g27828 | 1:31,315,356-31,317,514 | + | C1H1g02547 | CX1g004814 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| C2H1g22369 | 1:31,329,142-31,334,217 | - | C1H1g20253 | CX1g004110 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| C2H1g22962 | 1:31,335,467-31,339,177 | - | C1H1g11730 | CX1g005102 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| C2H1g11237 | 1:31,341,563-31,344,088 | + | C1H1g13234 | CX1g005055 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| C2H1g27943 | 1:31,347,496-31,349,454 | + | C1H1g29263 | CX1g001550 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |
| C2H1g07991 | 1:31,351,269-31,352,885 | + | C1H1g29263 | CX1g002001 | LOC_Os01g61190 | Os01g0827600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018315 | 12:15,824,684-15,826,880 | + | C1H12g02587 | C2H12g23449 | LOC_Os12g31000 | Os12g0493900 | - | Detail |
| CX12g015675 | 12:15,840,534-15,840,743 | + | - | - | - | - | - | Detail |
| CX12g017083 | 12:15,842,654-15,842,839 | - | - | - | - | - | - | Detail |
| CX12g015637 | 12:15,879,900-15,880,212 | + | C1H1g30954 | C2H12g29399 | LOC_Os01g40540 | Os12g0574700 | - | Detail |
| CX12g015158 | 12:15,893,500-15,894,252 | + | - | - | - | - | - | Detail |
| CX12g016603 | 12:15,918,174-15,918,692 | + | - | - | - | - | - | Detail |
| CX12g016473 | 12:15,930,281-15,935,569 | - | C1H12g24169 | C2H12g15598 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| CX12g018451 | 12:15,936,563-15,940,973 | + | C1H12g21564 | C2H12g01730 | LOC_Os12g31160 | Os12g0495600 | - | Detail |
| CX12g017027 | 12:15,951,009-15,951,161 | - | - | - | - | - | - | Detail |
| CX12g017775 | 12:15,974,079-15,975,293 | + | C1H12g10088 | C2H12g09553 | LOC_Os12g31560 | Os12g0608500 | - | Detail |
| CX12g017330 | 12:15,980,939-15,981,172 | - | - | - | - | - | - | Detail |
| CX12g015200 | 12:16,010,700-16,014,736 | - | C1H12g08326 | C2H12g30578 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| CX12g018728 | 12:16,019,393-16,026,041 | + | C1H12g04747 | C2H12g01730 | LOC_Os12g31160 | Os12g0495600 | - | Detail |
| CX12g015493 | 12:16,033,792-16,039,630 | + | - | - | LOC_Os12g33650 | Os11g0476333 | - | Detail |
| CX12g017492 | 12:16,051,718-16,053,389 | - | C1H12g16592 | C2H12g13557 | LOC_Os12g31340 | Os12g0496700 | - | Detail |
| CX12g018401 | 12:16,056,847-16,061,377 | - | C1H12g06556 | C2H12g18907 | LOC_Os12g31350 | Os12g0496900 | - | Detail |
| CX12g016965 | 12:16,066,890-16,069,545 | + | C1H12g20250 | C2H12g06486 | LOC_Os12g31370 | Os12g0497300 | RAD51A2, OsRad51A2, OsRAD51 | Detail |
| CX12g016672 | 12:16,070,575-16,073,326 | - | C1H12g18512 | C2H12g02588 | LOC_Os12g31380 | Os12g0497400 | - | Detail |
| CX12g016658 | 12:16,079,483-16,079,725 | + | - | - | - | - | - | Detail |
| CX12g017498 | 12:16,083,413-16,084,288 | - | C1H12g16920 | C2H12g09359 | LOC_Os12g31410 | Os12g0152800 | - | Detail |