| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g05592 | 9:18,644,503-18,646,329 | + | C1H9g00595 | CX9g057943 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| C2H9g14746 | 9:18,650,500-18,653,213 | - | C1H9g31011 | CX9g057604 | LOC_Os09g38100 | Os09g0554000 | - | Detail |
| C2H9g14838 | 9:18,656,865-18,657,476 | - | C1H9g27301 | CX9g055725 | LOC_Os09g38110 | Os09g0554200 | - | Detail |
| C2H9g06100 | 9:18,664,288-18,671,665 | + | C1H9g27672 | CX9g057048 | LOC_Os09g38130 | Os09g0554300 | OsPILS7a | Detail |
| C2H9g02006 | 9:18,688,244-18,691,689 | + | - | - | - | - | - | Detail |
| C2H9g08921 | 9:18,689,528-18,692,789 | - | - | - | LOC_Os09g25520 | Os02g0467500 | - | Detail |
| C2H9g22067 | 9:18,698,025-18,704,972 | + | C1H9g05514 | CX9g057828 | LOC_Os09g38239 | Os09g0555150 | - | Detail |
| C2H9g17283 | 9:18,707,889-18,722,432 | + | C1H9g12988 | - | - | - | - | Detail |
| C2H9g08352 | 9:18,730,034-18,730,383 | + | - | - | - | Os09g0555450 | - | Detail |
| C2H9g23691 | 9:18,730,425-18,730,618 | + | - | - | - | - | - | Detail |
| C2H9g08531 | 9:18,731,449-18,734,222 | - | C1H9g00138 | CX9g056693 | LOC_Os09g38320 | Os09g0555500 | OsPSY3 | Detail |
| C2H9g15848 | 9:18,737,466-18,747,316 | - | C1H9g26155 | CX9g056039 | LOC_Os09g38330 | Os09g0555600 | - | Detail |
| C2H9g23507 | 9:18,755,192-18,756,544 | - | C1H9g28461 | CX9g056277 | LOC_Os09g38340 | Os09g0555700 | - | Detail |
| C2H9g03686 | 9:18,759,561-18,760,287 | - | C1H9g30322 | CX9g056277 | LOC_Os09g38340 | Os09g0555700 | - | Detail |
| C2H9g16440 | 9:18,774,283-18,776,295 | - | C1H9g19146 | CX9g056374 | LOC_Os09g38350 | Os09g0555800 | OsCNL2 | Detail |
| C2H9g26103 | 9:18,783,949-18,786,569 | - | C1H9g02315 | CX9g056720 | LOC_Os09g38370 | Os09g0556000 | - | Detail |
| C2H9g08303 | 9:18,789,788-18,793,913 | + | C1H9g14465 | CX9g056177 | LOC_Os09g38390 | Os09g0556200 | - | Detail |
| C2H9g24654 | 9:18,795,973-18,798,381 | + | C1H9g23531 | CX9g056439 | LOC_Os09g38400 | - | - | Detail |
| C2H9g15218 | 9:18,799,325-18,805,284 | - | C1H9g07170 | CX9g057830 | LOC_Os09g38410 | Os09g0556400 | OsPHT4;5 | Detail |
| C2H9g15403 | 9:18,805,734-18,811,528 | - | C1H9g24737 | CX9g056846 | LOC_Os09g38420 | Os09g0556500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018315 | 12:15,824,684-15,826,880 | + | C1H12g02587 | C2H12g23449 | LOC_Os12g31000 | Os12g0493900 | - | Detail |
| CX12g015675 | 12:15,840,534-15,840,743 | + | - | - | - | - | - | Detail |
| CX12g017083 | 12:15,842,654-15,842,839 | - | - | - | - | - | - | Detail |
| CX12g015637 | 12:15,879,900-15,880,212 | + | C1H1g30954 | C2H12g29399 | LOC_Os01g40540 | Os12g0574700 | - | Detail |
| CX12g015158 | 12:15,893,500-15,894,252 | + | - | - | - | - | - | Detail |
| CX12g016603 | 12:15,918,174-15,918,692 | + | - | - | - | - | - | Detail |
| CX12g016473 | 12:15,930,281-15,935,569 | - | C1H12g24169 | C2H12g15598 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| CX12g018451 | 12:15,936,563-15,940,973 | + | C1H12g21564 | C2H12g01730 | LOC_Os12g31160 | Os12g0495600 | - | Detail |
| CX12g017027 | 12:15,951,009-15,951,161 | - | - | - | - | - | - | Detail |
| CX12g017775 | 12:15,974,079-15,975,293 | + | C1H12g10088 | C2H12g09553 | LOC_Os12g31560 | Os12g0608500 | - | Detail |
| CX12g017330 | 12:15,980,939-15,981,172 | - | - | - | - | - | - | Detail |
| CX12g015200 | 12:16,010,700-16,014,736 | - | C1H12g08326 | C2H12g30578 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| CX12g018728 | 12:16,019,393-16,026,041 | + | C1H12g04747 | C2H12g01730 | LOC_Os12g31160 | Os12g0495600 | - | Detail |
| CX12g015493 | 12:16,033,792-16,039,630 | + | - | - | LOC_Os12g33650 | Os11g0476333 | - | Detail |
| CX12g017492 | 12:16,051,718-16,053,389 | - | C1H12g16592 | C2H12g13557 | LOC_Os12g31340 | Os12g0496700 | - | Detail |
| CX12g018401 | 12:16,056,847-16,061,377 | - | C1H12g06556 | C2H12g18907 | LOC_Os12g31350 | Os12g0496900 | - | Detail |
| CX12g016965 | 12:16,066,890-16,069,545 | + | C1H12g20250 | C2H12g06486 | LOC_Os12g31370 | Os12g0497300 | RAD51A2, OsRad51A2, OsRAD51 | Detail |
| CX12g016672 | 12:16,070,575-16,073,326 | - | C1H12g18512 | C2H12g02588 | LOC_Os12g31380 | Os12g0497400 | - | Detail |
| CX12g016658 | 12:16,079,483-16,079,725 | + | - | - | - | - | - | Detail |
| CX12g017498 | 12:16,083,413-16,084,288 | - | C1H12g16920 | C2H12g09359 | LOC_Os12g31410 | Os12g0152800 | - | Detail |