| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g29145 | 6:23,706,166-23,709,605 | + | C1H6g30289 | CX6g043417 | LOC_Os06g44970 | Os06g0660200 | OsPIN2, PIN2 | Detail |
| C2H6g26561 | 6:23,723,911-23,725,981 | + | C1H6g10775 | CX6g042267 | LOC_Os06g45000 | Os06g0660700 | - | Detail |
| C2H6g03279 | 6:23,729,251-23,735,932 | + | C1H6g30897 | CX6g042767 | LOC_Os06g45020 | Os06g0660800 | - | Detail |
| C2H6g19984 | 6:23,746,714-23,747,683 | - | C1H6g04237 | CX6g043377 | - | - | - | Detail |
| C2H6g15814 | 6:23,749,994-23,753,615 | + | C1H6g27462 | CX6g044438 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| C2H6g03533 | 6:23,754,072-23,755,023 | - | C1H6g20860 | CX6g043401 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| C2H6g07549 | 6:23,757,720-23,762,154 | - | C1H6g10184 | CX6g042847 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| C2H6g01023 | 6:23,765,678-23,766,594 | + | C1H6g11026 | CX6g044489 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| C2H6g04346 | 6:23,767,921-23,768,905 | - | C1H6g25522 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C2H6g03075 | 6:23,769,309-23,770,521 | - | C1H6g25522 | CX6g042632 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| C2H6g29640 | 6:23,771,435-23,776,537 | - | C1H6g23408 | CX6g045877 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| C2H6g27870 | 6:23,777,747-23,784,336 | - | C1H6g23397 | CX6g045100 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| C2H6g22069 | 6:23,790,852-23,792,411 | - | C1H11g18273 | - | - | - | - | Detail |
| C2H6g29043 | 6:23,794,036-23,796,026 | - | C1H6g11972 | CX6g043798 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| C2H6g07889 | 6:23,827,399-23,831,478 | - | C1H6g07836 | CX6g043246 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| C2H6g25016 | 6:23,832,265-23,837,611 | - | C1H6g25311 | CX6g043895 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| C2H6g04522 | 6:23,852,131-23,854,533 | + | C1H6g07255 | CX6g044109 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| C2H6g09171 | 6:23,855,710-23,859,081 | - | C1H6g04964 | CX6g042273 | LOC_Os06g45310 | Os06g0663500 | - | Detail |
| C2H6g13796 | 6:23,865,676-23,867,856 | - | C1H6g11988 | CX6g041502 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| C2H6g08478 | 6:23,869,531-23,870,802 | - | C1H6g24851 | CX6g045945 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018630 | 12:14,463,361-14,467,718 | - | C1H12g17057 | C2H12g28215 | LOC_Os12g27994 | Os12g0465700 | DEC, dec*, dec | Detail |
| CX12g015187 | 12:14,469,789-14,470,760 | - | C1H12g19519 | C2H12g24524 | LOC_Os12g27994 | Os12g0465800 | - | Detail |
| CX12g015152 | 12:14,479,021-14,479,519 | - | - | - | LOC_Os12g26850 | - | - | Detail |
| CX12g015060 | 12:14,497,595-14,498,008 | + | - | - | - | - | - | Detail |
| CX12g018657 | 12:14,504,842-14,505,622 | + | C1H12g27314 | C2H12g01579 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| CX12g015667 | 12:14,531,066-14,532,479 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| CX12g017265 | 12:14,543,652-14,543,978 | + | C1H3g20730 | C2H12g05943 | LOC_Os12g27980 | Os05g0219300 | - | Detail |
| CX12g016802 | 12:14,564,392-14,565,927 | + | C1H12g05419 | C2H12g17782 | LOC_Os12g28177 | Os12g0467700 | - | Detail |
| CX12g016836 | 12:14,602,372-14,605,785 | + | C1H12g11838 | C2H12g27812 | LOC_Os12g28260 | Os12g0468500 | OsCNGC5 | Detail |
| CX12g017240 | 12:14,606,010-14,612,102 | - | C1H12g15040 | C2H12g16369 | LOC_Os12g28270 | Os12g0468600 | - | Detail |
| CX12g018615 | 12:14,613,002-14,614,706 | + | - | - | - | - | - | Detail |
| CX12g016718 | 12:14,630,452-14,630,940 | + | C1H12g05419 | C2H12g17782 | LOC_Os12g28177 | Os12g0471100 | - | Detail |
| CX12g017257 | 12:14,632,509-14,636,526 | + | C1H12g25201 | C2H12g16438 | LOC_Os02g17020 | - | - | Detail |
| CX12g017001 | 12:14,651,233-14,651,625 | + | - | - | - | - | - | Detail |
| CX12g016680 | 12:14,660,485-14,660,712 | - | - | - | - | - | - | Detail |
| CX12g016867 | 12:14,672,872-14,674,395 | - | C1H12g09824 | C2H12g21911 | LOC_Os12g28177 | Os12g0470700 | - | Detail |
| CX12g015113 | 12:14,689,992-14,690,141 | + | C1H4g20138 | - | - | - | - | Detail |
| CX12g017176 | 12:14,697,926-14,700,564 | + | C1H12g26205 | C2H12g19909 | LOC_Os06g36530 | - | - | Detail |
| CX12g015400 | 12:14,702,481-14,704,187 | + | C1H12g10027 | C2H12g20584 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| CX12g015433 | 12:14,727,730-14,730,117 | - | C1H12g13184 | C2H12g07430 | LOC_Os12g28770 | Os12g0472800 | - | Detail |