| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14276 | 6:2,409,330-2,409,740 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g13336 | 6:2,410,289-2,410,699 | + | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g17841 | 6:2,411,428-2,412,749 | - | C1H6g10484 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g26766 | 6:2,412,783-2,413,085 | - | C1H6g06000 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g20170 | 6:2,415,673-2,419,060 | - | C1H6g16222 | CX6g044314 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| C2H6g19792 | 6:2,425,862-2,428,256 | - | C1H6g16022 | CX6g045401 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| C2H6g23161 | 6:2,429,699-2,437,037 | - | C1H6g13902 | CX6g043739 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| C2H6g04920 | 6:2,440,742-2,441,143 | - | - | CX6g042247 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| C2H6g21185 | 6:2,447,612-2,448,320 | + | C1H6g16824 | CX6g043772 | LOC_Os06g06610 | Os06g0161400 | - | Detail |
| C2H6g23055 | 6:2,459,795-2,461,268 | + | C1H6g25939 | CX6g045596 | LOC_Os06g06660 | Os06g0161800 | - | Detail |
| C2H6g19839 | 6:2,463,500-2,464,735 | + | C1H6g28340 | CX6g045596 | LOC_Os06g06670 | Os06g0161900 | - | Detail |
| C2H6g03972 | 6:2,466,564-2,467,051 | + | C1H6g28340 | - | - | - | - | Detail |
| C2H6g09639 | 6:2,467,292-2,468,545 | + | C1H6g29965 | CX6g045596 | LOC_Os06g06680 | Os06g0162100 | - | Detail |
| C2H6g11445 | 6:2,472,834-2,473,430 | + | C1H6g29965 | - | LOC_Os06g06580 | Os06g0161100 | - | Detail |
| C2H6g23738 | 6:2,491,525-2,493,444 | + | C1H6g05484 | CX6g045922 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| C2H6g27712 | 6:2,494,006-2,505,037 | - | C1H6g16792 | CX6g045009 | LOC_Os06g06730 | Os06g0162550 | OsZAS2 | Detail |
| C2H6g18003 | 6:2,506,220-2,508,521 | + | C1H6g20899 | CX6g044673 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| C2H6g28937 | 6:2,509,188-2,515,333 | - | C1H6g08500 | CX6g042913 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| C2H6g12221 | 6:2,520,562-2,521,083 | - | - | CX6g042202 | - | - | - | Detail |
| C2H6g12042 | 6:2,521,710-2,526,662 | - | C1H6g00041 | CX6g044205 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018630 | 12:14,463,361-14,467,718 | - | C1H12g17057 | C2H12g28215 | LOC_Os12g27994 | Os12g0465700 | DEC, dec*, dec | Detail |
| CX12g015187 | 12:14,469,789-14,470,760 | - | C1H12g19519 | C2H12g24524 | LOC_Os12g27994 | Os12g0465800 | - | Detail |
| CX12g015152 | 12:14,479,021-14,479,519 | - | - | - | LOC_Os12g26850 | - | - | Detail |
| CX12g015060 | 12:14,497,595-14,498,008 | + | - | - | - | - | - | Detail |
| CX12g018657 | 12:14,504,842-14,505,622 | + | C1H12g27314 | C2H12g01579 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| CX12g015667 | 12:14,531,066-14,532,479 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| CX12g017265 | 12:14,543,652-14,543,978 | + | C1H3g20730 | C2H12g05943 | LOC_Os12g27980 | Os05g0219300 | - | Detail |
| CX12g016802 | 12:14,564,392-14,565,927 | + | C1H12g05419 | C2H12g17782 | LOC_Os12g28177 | Os12g0467700 | - | Detail |
| CX12g016836 | 12:14,602,372-14,605,785 | + | C1H12g11838 | C2H12g27812 | LOC_Os12g28260 | Os12g0468500 | OsCNGC5 | Detail |
| CX12g017240 | 12:14,606,010-14,612,102 | - | C1H12g15040 | C2H12g16369 | LOC_Os12g28270 | Os12g0468600 | - | Detail |
| CX12g018615 | 12:14,613,002-14,614,706 | + | - | - | - | - | - | Detail |
| CX12g016718 | 12:14,630,452-14,630,940 | + | C1H12g05419 | C2H12g17782 | LOC_Os12g28177 | Os12g0471100 | - | Detail |
| CX12g017257 | 12:14,632,509-14,636,526 | + | C1H12g25201 | C2H12g16438 | LOC_Os02g17020 | - | - | Detail |
| CX12g017001 | 12:14,651,233-14,651,625 | + | - | - | - | - | - | Detail |
| CX12g016680 | 12:14,660,485-14,660,712 | - | - | - | - | - | - | Detail |
| CX12g016867 | 12:14,672,872-14,674,395 | - | C1H12g09824 | C2H12g21911 | LOC_Os12g28177 | Os12g0470700 | - | Detail |
| CX12g015113 | 12:14,689,992-14,690,141 | + | C1H4g20138 | - | - | - | - | Detail |
| CX12g017176 | 12:14,697,926-14,700,564 | + | C1H12g26205 | C2H12g19909 | LOC_Os06g36530 | - | - | Detail |
| CX12g015400 | 12:14,702,481-14,704,187 | + | C1H12g10027 | C2H12g20584 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| CX12g015433 | 12:14,727,730-14,730,117 | - | C1H12g13184 | C2H12g07430 | LOC_Os12g28770 | Os12g0472800 | - | Detail |