| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25698 | 4:18,561,902-18,562,768 | + | - | CX4g035076 | LOC_Os04g35580 | Os04g0436000 | - | Detail |
| C2H4g11818 | 4:18,565,115-18,568,046 | - | C1H4g12800 | CX4g033235 | LOC_Os04g35590 | Os04g0436100 | OsACOT | Detail |
| C2H4g10059 | 4:18,569,922-18,572,562 | - | C1H4g13941 | CX4g035055 | LOC_Os04g35600 | Os04g0436300 | - | Detail |
| C2H4g20532 | 4:18,573,215-18,575,272 | - | C1H4g30087 | CX4g035131 | LOC_Os04g35610 | Os04g0584700 | - | Detail |
| C2H4g09494 | 4:18,581,084-18,582,090 | + | C1H4g19500 | CX4g034176 | - | - | - | Detail |
| C2H4g28461 | 4:18,584,286-18,586,448 | - | C1H4g30087 | CX4g032362 | LOC_Os04g35650 | Os04g0436800 | - | Detail |
| C2H4g06819 | 4:18,592,097-18,593,388 | + | C1H4g00410 | CX4g036547 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| C2H4g24561 | 4:18,604,293-18,606,448 | + | C1H4g01937 | CX4g031828 | LOC_Os04g35680 | Os04g0437300 | - | Detail |
| C2H4g08680 | 4:18,609,812-18,610,978 | + | C1H4g17106 | CX4g032014 | LOC_Os04g35690 | Os04g0437500 | - | Detail |
| C2H4g05233 | 4:18,611,504-18,617,577 | - | C1H4g05515 | CX4g034057 | LOC_Os04g35700 | Os04g0437600 | - | Detail |
| C2H4g05802 | 4:18,634,103-18,637,903 | + | - | CX4g032455 | - | - | - | Detail |
| C2H4g06334 | 4:18,644,831-18,645,349 | - | - | - | LOC_Os04g35730 | - | - | Detail |
| C2H4g19687 | 4:18,649,476-18,649,949 | - | - | CX4g031523 | LOC_Os04g35750 | Os04g0438200 | - | Detail |
| C2H4g05613 | 4:18,650,820-18,652,943 | - | C1H4g09818 | CX4g034717 | LOC_Os04g35760 | Os04g0438300 | - | Detail |
| C2H4g06627 | 4:18,653,242-18,654,681 | + | C1H4g28360 | CX4g035860 | LOC_Os04g35770 | Os04g0438400 | - | Detail |
| C2H4g00301 | 4:18,656,895-18,659,262 | - | C1H4g19872 | CX4g033240 | LOC_Os04g35780 | Os04g0438500 | - | Detail |
| C2H4g06596 | 4:18,666,243-18,669,708 | - | C1H4g20672 | CX4g035378 | LOC_Os04g35790 | Os04g0438600 | - | Detail |
| C2H4g10039 | 4:18,673,157-18,682,049 | - | C1H4g03937 | CX4g036235 | LOC_Os04g35800 | Os04g0438700 | - | Detail |
| C2H4g02895 | 4:18,699,780-18,705,579 | + | C1H4g25308 | CX4g035826 | LOC_Os04g35840 | Os04g0439100 | - | Detail |
| C2H4g26325 | 4:18,706,961-18,709,701 | + | C1H4g23816 | CX4g035975 | LOC_Os04g35860 | Os04g0439200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g017783 | 12:13,762,194-13,763,534 | + | C1H2g04140 | C2H12g22700 | - | - | - | Detail |
| CX12g015053 | 12:13,786,746-13,786,934 | + | - | - | - | - | - | Detail |
| CX12g015140 | 12:13,809,091-13,809,483 | + | C1H12g26749 | C2H12g27495 | - | Os12g0614600 | OsPID | Detail |
| CX12g018218 | 12:13,851,259-13,852,891 | + | C1H12g22387 | C2H12g01698 | LOC_Os12g26880 | Os12g0454600 | - | Detail |
| CX12g017787 | 12:13,887,092-13,890,319 | - | C1H12g13346 | C2H12g26986 | LOC_Os12g26940 | Os12g0454800 | CRL4, CHARK, S/T kinase, OsCRL4, OsHKL1, OsCDP | Detail |
| CX12g017242 | 12:13,890,528-13,890,704 | + | - | - | - | Os12g0568166 | - | Detail |
| CX12g016039 | 12:13,895,114-13,895,392 | + | C1H12g10028 | C2H12g26277 | - | - | - | Detail |
| CX12g015279 | 12:13,901,192-13,901,479 | + | - | C2H12g14469 | - | - | - | Detail |
| CX12g015970 | 12:13,901,511-13,901,831 | - | - | - | - | - | - | Detail |
| CX12g017142 | 12:13,939,030-13,939,404 | - | C1H12g16677 | - | LOC_Os12g27050 | Os12g0456000 | - | Detail |
| CX12g017975 | 12:13,941,580-13,944,930 | + | C1H12g23121 | C2H12g20253 | LOC_Os12g27060 | Os12g0456100 | - | Detail |
| CX12g016746 | 12:13,951,300-13,953,715 | - | C1H12g22119 | C2H12g20046 | LOC_Os12g27070 | Os12g0456200 | - | Detail |
| CX12g016323 | 12:13,958,382-13,958,810 | - | C1H12g10862 | C2H12g09925 | LOC_Os12g27080 | Os12g0456300 | - | Detail |
| CX12g016453 | 12:13,959,243-13,967,425 | + | C1H12g04965 | C2H12g00613 | LOC_Os12g27090 | Os12g0456400 | - | Detail |
| CX12g016959 | 12:13,977,333-13,978,170 | + | C1H12g25831 | C2H12g10115 | LOC_Os12g27190 | Os12g0457200 | - | Detail |
| CX12g015426 | 12:13,986,647-13,986,958 | + | - | - | - | - | - | Detail |
| CX12g016379 | 12:13,990,116-13,990,307 | + | - | - | - | - | - | Detail |
| CX12g018094 | 12:14,003,197-14,008,379 | - | C1H12g18821 | C2H12g06376 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| CX12g017859 | 12:14,036,856-14,039,967 | - | C1H12g02272 | C2H12g06376 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| CX12g016893 | 12:14,057,249-14,059,631 | - | C1H12g15735 | C2H12g20196 | LOC_Os12g27350 | Os12g0459100 | - | Detail |