| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g26258 | 4:24,258,210-24,261,486 | - | C2H4g19992 | CX4g035060 | LOC_Os04g47040 | Os04g0557200 | - | Detail |
| C1H4g30680 | 4:24,277,225-24,277,969 | - | C2H4g05198 | CX4g035060 | LOC_Os04g47059 | Os04g0557200 | - | Detail |
| C1H4g17780 | 4:24,281,945-24,282,927 | - | C2H4g05198 | CX4g035060 | LOC_Os04g47040 | Os04g0557500 | Kala4, OSB2 | Detail |
| C1H4g09612 | 4:24,298,299-24,301,968 | - | C2H4g28370 | CX4g035414 | LOC_Os04g47080 | Os04g0557800 | - | Detail |
| C1H4g23588 | 4:24,312,177-24,313,487 | - | C2H4g04058 | CX4g031913 | LOC_Os04g47110 | Os04g0558200 | - | Detail |
| C1H4g12924 | 4:24,314,712-24,321,298 | + | C2H4g18368 | CX4g035807 | LOC_Os04g47120 | Os04g0558400 | - | Detail |
| C1H4g13759 | 4:24,321,953-24,323,064 | - | C2H4g21310 | CX4g036142 | LOC_Os04g47130 | Os04g0558500 | - | Detail |
| C1H4g25980 | 4:24,342,024-24,342,531 | + | C2H4g22229 | CX4g035913 | LOC_Os04g47170 | - | - | Detail |
| C1H4g20062 | 4:24,342,546-24,343,999 | + | C2H4g07722 | CX4g035913 | LOC_Os04g47170 | Os04g0559100 | - | Detail |
| C1H4g30198 | 4:24,344,355-24,350,299 | - | C2H4g00730 | CX4g034722 | LOC_Os04g47180 | Os04g0559200 | - | Detail |
| C1H4g26769 | 4:24,358,722-24,362,501 | - | C2H4g15295 | CX4g035770 | LOC_Os04g47190 | Os04g0559400 | - | Detail |
| C1H4g01512 | 4:24,364,900-24,366,658 | - | C2H4g27884 | - | LOC_Os04g47200 | Os04g0559550 | - | Detail |
| C1H4g23739 | 4:24,370,066-24,371,850 | + | C2H4g05213 | CX4g032090 | LOC_Os04g47220 | Os04g0559700 | OsPIP1;2 | Detail |
| C1H4g10381 | 4:24,372,759-24,381,348 | - | C2H4g27920 | CX4g034281 | LOC_Os04g47240 | Os04g0559800 | SMG2, OsMKKK10, MKKK10, SMG2/OsMKKK10 | Detail |
| C1H4g01866 | 4:24,387,635-24,389,258 | + | C2H4g00919 | CX4g032012 | LOC_Os04g47260 | Os04g0560200 | - | Detail |
| C1H4g14235 | 4:24,389,694-24,393,011 | - | C2H4g23249 | CX4g034678 | LOC_Os04g47270 | Os04g0560300 | - | Detail |
| C1H4g22466 | 4:24,393,726-24,396,922 | - | C2H4g15141 | CX4g031503 | LOC_Os04g47280 | Os04g0560400 | - | Detail |
| C1H4g11646 | 4:24,399,268-24,402,890 | + | C2H4g28578 | CX4g034744 | LOC_Os04g47290 | Os04g0560500 | - | Detail |
| C1H4g00637 | 4:24,403,372-24,405,915 | - | C2H4g00072 | CX4g033341 | LOC_Os04g47300 | Os04g0560600 | CDPK12, OsCDPK12, OsCPK12, ESL4 | Detail |
| C1H4g08087 | 4:24,409,539-24,410,083 | + | C2H4g08768 | CX4g033231 | LOC_Os04g47310 | Os04g0560700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016236 | 12:12,101,092-12,114,456 | - | C1H12g01462 | C2H12g09366 | LOC_Os12g24250 | Os12g0430000 | - | Detail |
| CX12g015893 | 12:12,121,491-12,122,222 | + | C1H12g04637 | C2H12g14559 | LOC_Os12g24555 | - | - | Detail |
| CX12g015644 | 12:12,123,152-12,124,284 | + | - | C2H12g27239 | LOC_Os11g14590 | - | - | Detail |
| CX12g016290 | 12:12,134,184-12,135,070 | + | - | - | - | - | - | Detail |
| CX12g017500 | 12:12,165,264-12,165,608 | - | - | - | - | Os12g0430750 | - | Detail |
| CX12g018091 | 12:12,169,874-12,170,071 | - | - | - | - | - | - | Detail |
| CX12g018132 | 12:12,184,720-12,186,264 | + | C1H12g02746 | C2H12g04517 | LOC_Os12g24320 | Os12g0431100 | - | Detail |
| CX12g016444 | 12:12,202,180-12,202,548 | + | - | - | - | - | - | Detail |
| CX12g015770 | 12:12,203,441-12,203,611 | + | - | C2H12g14972 | - | - | - | Detail |
| CX12g016309 | 12:12,213,269-12,213,448 | + | - | - | - | Os07g0137500 | - | Detail |
| CX12g015966 | 12:12,217,678-12,222,719 | - | C1H12g28046 | - | LOC_Os12g24330 | Os12g0431300 | - | Detail |
| CX12g017120 | 12:12,265,403-12,265,639 | - | - | - | - | - | - | Detail |
| CX12g018511 | 12:12,265,948-12,269,526 | + | C1H12g16885 | C2H12g16529 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| CX12g015483 | 12:12,273,120-12,274,088 | - | C1H12g31271 | C2H12g01862 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| CX12g017958 | 12:12,280,708-12,283,181 | + | - | C2H12g16709 | LOC_Os12g24450 | - | - | Detail |
| CX12g017108 | 12:12,311,892-12,312,449 | + | C1H12g09328 | C2H12g10767 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| CX12g018517 | 12:12,318,328-12,318,588 | + | - | - | - | - | - | Detail |
| CX12g018644 | 12:12,343,956-12,344,597 | - | C1H12g09328 | C2H12g10767 | LOC_Os12g24530 | Os12g0432600 | - | Detail |
| CX12g016145 | 12:12,347,061-12,353,233 | - | C1H12g01818 | C2H12g22841 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| CX12g017543 | 12:12,357,820-12,358,050 | + | - | - | - | - | - | Detail |