| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20696 | 6:25,930,781-25,933,894 | - | C1H6g06713 | CX6g043150 | LOC_Os06g48700 | Os06g0700500 | - | Detail |
| C2H6g06236 | 6:25,937,667-25,945,307 | - | C1H6g22333 | CX6g042222 | LOC_Os06g48720 | Os06g0700700 | HMA2, OsHMA2, osHMA2 | Detail |
| C2H6g28660 | 6:25,968,091-25,971,526 | - | C1H6g21711 | CX6g044182 | LOC_Os06g48750 | Os06g0701100 | - | Detail |
| C2H6g21072 | 6:25,973,429-25,980,153 | - | C1H6g30062 | CX6g042449 | LOC_Os06g48760 | Os06g0701200 | - | Detail |
| C2H6g10219 | 6:25,980,821-25,988,512 | - | C1H6g30249 | CX6g041951 | LOC_Os06g48770 | Os06g0701300 | - | Detail |
| C2H6g25221 | 6:25,994,202-25,995,431 | - | C1H6g22709 | CX6g042380 | LOC_Os06g48780 | Os06g0701400 | - | Detail |
| C2H6g12207 | 6:25,998,108-26,001,539 | + | C1H6g30798 | CX6g042431 | LOC_Os06g48790 | - | - | Detail |
| C2H6g29564 | 6:26,003,412-26,005,133 | - | C1H6g22238 | CX6g044354 | LOC_Os06g48800 | Os06g0701600 | OsHKT2;4, OsHKT9 | Detail |
| C2H6g13374 | 6:26,016,074-26,017,991 | - | C1H6g25250 | CX6g044354 | LOC_Os06g48810 | Os06g0701700 | - | Detail |
| C2H6g06552 | 6:26,079,605-26,084,073 | + | - | - | - | - | - | Detail |
| C2H6g10307 | 6:26,084,079-26,084,489 | + | C1H6g03679 | CX6g045889 | LOC_Os06g48850 | Os06g0701900 | OsSAUR27 | Detail |
| C2H6g07274 | 6:26,086,750-26,087,184 | - | C1H6g20549 | CX6g041384 | LOC_Os06g48860 | Os06g0702000 | - | Detail |
| C2H6g14535 | 6:26,098,794-26,100,961 | + | C1H6g03943 | CX6g045144 | LOC_Os06g48870 | Os06g0702100 | - | Detail |
| C2H6g11925 | 6:26,108,509-26,116,554 | + | C1H6g13761 | CX6g043833 | LOC_Os06g48940 | Os06g0702500 | - | Detail |
| C2H6g09619 | 6:26,141,819-26,149,954 | + | C1H6g08040 | CX6g042776 | LOC_Os06g48950 | Os06g0702600 | ARF7A, OsARF7a, OsARF19 | Detail |
| C2H6g06313 | 6:26,150,363-26,152,368 | - | C1H6g18606 | CX6g044368 | LOC_Os06g48960 | Os06g0702700 | - | Detail |
| C2H6g28533 | 6:26,155,218-26,158,203 | + | C1H6g07052 | CX6g045073 | LOC_Os06g48970 | Os06g0702800 | - | Detail |
| C2H6g03801 | 6:26,160,897-26,163,822 | - | C1H6g09670 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C2H6g17371 | 6:26,168,030-26,172,711 | - | C1H6g18502 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C2H6g15424 | 6:26,178,710-26,181,492 | + | C1H6g29648 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016907 | 12:8,000,855-8,003,924 | - | C1H12g31185 | C2H12g05917 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| CX12g016989 | 12:8,012,420-8,013,259 | - | C1H12g12669 | C2H12g24213 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| CX12g018452 | 12:8,026,608-8,026,829 | - | - | - | - | - | - | Detail |
| CX12g015859 | 12:8,040,491-8,040,661 | + | - | - | LOC_Os12g16510 | Os12g0265800 | - | Detail |
| CX12g017061 | 12:8,043,096-8,048,637 | - | - | - | LOC_Os12g16600 | - | - | Detail |
| CX12g016128 | 12:8,051,136-8,051,453 | - | - | - | - | - | - | Detail |
| CX12g015656 | 12:8,055,364-8,060,216 | + | C1H12g30337 | C2H12g15577 | LOC_Os12g16620 | Os12g0625200 | - | Detail |
| CX12g015139 | 12:8,083,498-8,083,977 | - | - | C2H12g13855 | - | - | - | Detail |
| CX12g016493 | 12:8,084,742-8,099,667 | + | C1H12g04576 | C2H12g25263 | LOC_Os12g16660 | Os12g0267200 | - | Detail |
| CX12g015138 | 12:8,103,603-8,104,337 | - | - | - | - | Os12g0267400 | - | Detail |
| CX12g015504 | 12:8,103,961-8,104,404 | + | C1H12g26358 | C2H12g29205 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| CX12g018023 | 12:8,114,641-8,115,141 | + | C1H12g24303 | C2H12g22341 | LOC_Os12g16370 | - | - | Detail |
| CX12g016003 | 12:8,119,682-8,122,583 | + | C1H12g20439 | C2H12g01086 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| CX12g018224 | 12:8,135,284-8,136,951 | - | C1H12g24834 | C2H12g04535 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| CX12g016088 | 12:8,171,704-8,171,901 | + | - | - | - | - | - | Detail |
| CX12g016934 | 12:8,176,574-8,177,044 | + | - | C2H5g20535 | LOC_Os12g16890 | Os12g0269700 | - | Detail |
| CX12g016800 | 12:8,198,364-8,198,645 | + | - | C2H5g20535 | LOC_Os12g16890 | Os12g0269200 | - | Detail |
| CX12g017843 | 12:8,207,546-8,207,848 | - | - | - | - | - | - | Detail |
| CX12g016443 | 12:8,214,613-8,218,087 | - | C1H12g27646 | C2H12g04709 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| CX12g015910 | 12:8,223,995-8,225,245 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |