| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24456 | 4:15,350,612-15,355,045 | + | - | - | - | Os10g0428200 | - | Detail |
| C1H4g03298 | 4:15,359,042-15,360,166 | - | - | - | - | - | - | Detail |
| C1H4g24659 | 4:15,361,887-15,362,761 | - | - | - | - | - | - | Detail |
| C1H4g20870 | 4:15,442,918-15,443,955 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30160 | Os04g0370100 | - | Detail |
| C1H4g27310 | 4:15,444,139-15,445,422 | - | C2H4g11929 | - | - | - | - | Detail |
| C1H4g13550 | 4:15,457,825-15,458,796 | - | C2H4g27695 | CX4g033563 | LOC_Os04g30270 | Os04g0371200 | - | Detail |
| C1H4g00940 | 4:15,466,052-15,468,169 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30280 | Os04g0368000 | - | Detail |
| C1H4g15913 | 4:15,578,726-15,581,968 | + | C2H4g02498 | CX4g031772 | LOC_Os04g30420 | Os04g0372700 | - | Detail |
| C1H4g23526 | 4:15,582,279-15,587,129 | - | C2H4g10957 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C1H4g19886 | 4:15,593,804-15,594,498 | + | C2H4g23915 | - | - | - | - | Detail |
| C1H4g17345 | 4:15,595,574-15,598,445 | + | C2H4g15991 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C1H4g15354 | 4:15,602,056-15,603,672 | + | C2H4g25729 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C1H4g23534 | 4:15,616,897-15,620,151 | + | C2H4g27653 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C1H4g04442 | 4:15,660,626-15,663,910 | + | C2H4g16321 | CX4g032818 | LOC_Os04g30540 | Os04g0374000 | - | Detail |
| C1H4g28100 | 4:15,684,372-15,689,384 | - | - | - | - | - | - | Detail |
| C1H4g09226 | 4:15,692,550-15,695,774 | + | C2H4g25498 | CX4g032818 | LOC_Os04g30610 | Os04g0374000 | - | Detail |
| C1H4g09945 | 4:15,698,998-15,703,545 | - | C2H4g15638 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C1H4g09093 | 4:15,706,954-15,708,660 | - | C2H4g24509 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C1H4g14613 | 4:15,709,368-15,712,980 | - | C2H4g23366 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C1H4g11665 | 4:15,715,342-15,716,102 | + | C2H4g02514 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016907 | 12:8,000,855-8,003,924 | - | C1H12g31185 | C2H12g05917 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| CX12g016989 | 12:8,012,420-8,013,259 | - | C1H12g12669 | C2H12g24213 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| CX12g018452 | 12:8,026,608-8,026,829 | - | - | - | - | - | - | Detail |
| CX12g015859 | 12:8,040,491-8,040,661 | + | - | - | LOC_Os12g16510 | Os12g0265800 | - | Detail |
| CX12g017061 | 12:8,043,096-8,048,637 | - | - | - | LOC_Os12g16600 | - | - | Detail |
| CX12g016128 | 12:8,051,136-8,051,453 | - | - | - | - | - | - | Detail |
| CX12g015656 | 12:8,055,364-8,060,216 | + | C1H12g30337 | C2H12g15577 | LOC_Os12g16620 | Os12g0625200 | - | Detail |
| CX12g015139 | 12:8,083,498-8,083,977 | - | - | C2H12g13855 | - | - | - | Detail |
| CX12g016493 | 12:8,084,742-8,099,667 | + | C1H12g04576 | C2H12g25263 | LOC_Os12g16660 | Os12g0267200 | - | Detail |
| CX12g015138 | 12:8,103,603-8,104,337 | - | - | - | - | Os12g0267400 | - | Detail |
| CX12g015504 | 12:8,103,961-8,104,404 | + | C1H12g26358 | C2H12g29205 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| CX12g018023 | 12:8,114,641-8,115,141 | + | C1H12g24303 | C2H12g22341 | LOC_Os12g16370 | - | - | Detail |
| CX12g016003 | 12:8,119,682-8,122,583 | + | C1H12g20439 | C2H12g01086 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| CX12g018224 | 12:8,135,284-8,136,951 | - | C1H12g24834 | C2H12g04535 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| CX12g016088 | 12:8,171,704-8,171,901 | + | - | - | - | - | - | Detail |
| CX12g016934 | 12:8,176,574-8,177,044 | + | - | C2H5g20535 | LOC_Os12g16890 | Os12g0269700 | - | Detail |
| CX12g016800 | 12:8,198,364-8,198,645 | + | - | C2H5g20535 | LOC_Os12g16890 | Os12g0269200 | - | Detail |
| CX12g017843 | 12:8,207,546-8,207,848 | - | - | - | - | - | - | Detail |
| CX12g016443 | 12:8,214,613-8,218,087 | - | C1H12g27646 | C2H12g04709 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| CX12g015910 | 12:8,223,995-8,225,245 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |