| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g11981 | 4:22,247,167-22,262,155 | - | C2H4g20441 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C1H4g16776 | 4:22,265,929-22,266,408 | + | C2H4g11339 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C1H4g16652 | 4:22,273,773-22,275,269 | + | C2H4g01906 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| C1H4g26953 | 4:22,289,040-22,297,319 | + | C2H4g26482 | CX4g031449 | LOC_Os04g43130 | Os04g0510300 | - | Detail |
| C1H4g20471 | 4:22,297,962-22,303,906 | - | C2H4g00596 | CX4g031438 | LOC_Os04g43140 | Os04g0510400 | - | Detail |
| C1H4g03093 | 4:22,306,343-22,311,917 | + | C2H4g19563 | CX4g035958 | LOC_Os04g43150 | Os04g0510500 | - | Detail |
| C1H4g15211 | 4:22,312,483-22,313,610 | - | C2H4g02205 | CX4g032117 | LOC_Os04g43160 | Os04g0510600 | - | Detail |
| C1H4g29813 | 4:22,314,260-22,316,880 | - | C2H4g20983 | CX4g033894 | LOC_Os04g43164 | Os04g0510700 | - | Detail |
| C1H4g14181 | 4:22,318,026-22,318,794 | - | C2H4g07283 | CX4g036379 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| C1H4g12029 | 4:22,319,072-22,319,383 | - | C2H4g07283 | CX4g036379 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| C1H4g05553 | 4:22,324,231-22,325,673 | - | C2H4g15069 | CX4g033517 | LOC_Os04g43200 | Os04g0511200 | OsClo5, OsEFA27 | Detail |
| C1H4g09400 | 4:22,327,296-22,329,770 | - | C2H4g28433 | CX4g033340 | LOC_Os04g43210 | Os04g0511400 | - | Detail |
| C1H4g08179 | 4:22,333,306-22,339,230 | - | C2H4g23749 | CX4g035801 | LOC_Os04g43220 | Os04g0511600 | - | Detail |
| C1H4g06483 | 4:22,340,677-22,342,821 | - | C2H4g20352 | CX4g032463 | LOC_Os04g43230 | Os04g0511700 | - | Detail |
| C1H4g23962 | 4:22,345,909-22,354,374 | - | C2H4g11071 | CX4g032044 | LOC_Os04g43270 | Os04g0512200 | - | Detail |
| C1H4g05127 | 4:22,357,820-22,358,279 | - | C2H4g01985 | CX4g033280 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| C1H4g13576 | 4:22,359,001-22,360,364 | - | C2H4g01985 | CX4g033280 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| C1H4g19931 | 4:22,360,962-22,365,118 | - | C2H4g16701 | CX4g034378 | LOC_Os04g43300 | Os04g0512400 | - | Detail |
| C1H4g27340 | 4:22,367,404-22,367,799 | - | C2H4g10802 | CX4g035063 | LOC_Os04g43310 | Os04g0512500 | - | Detail |
| C1H4g13563 | 4:22,380,486-22,385,136 | - | C2H4g29440 | CX4g033268 | LOC_Os04g43340 | Os04g0512900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006993 | 1:7,522,623-7,522,841 | + | - | - | - | - | - | Detail |
| CX1g003654 | 1:7,527,644-7,535,260 | - | C1H1g29785 | C2H1g11549 | LOC_Os01g14932 | Os01g0253100 | - | Detail |
| CX1g005913 | 1:7,540,412-7,540,945 | + | - | C2H1g27442 | LOC_Os01g14940 | Os01g0253200 | OsPMEI2 | Detail |
| CX1g005041 | 1:7,543,510-7,548,328 | + | C1H1g19789 | C2H1g17851 | LOC_Os01g14950 | Os01g0253300 | - | Detail |
| CX1g002635 | 1:7,549,357-7,550,327 | - | C1H1g10698 | C2H1g21235 | LOC_Os01g14960 | Os01g0253400 | - | Detail |
| CX1g001520 | 1:7,556,892-7,557,884 | + | C1H1g00294 | C2H1g01331 | LOC_Os01g14970 | Os01g0253500 | - | Detail |
| CX1g004991 | 1:7,561,067-7,562,250 | - | C1H1g14416 | C2H1g04240 | LOC_Os01g14980 | Os01g0253600 | - | Detail |
| CX1g001442 | 1:7,565,520-7,566,280 | - | C1H1g19580 | C2H1g05537 | LOC_Os01g14990 | Os01g0253800 | - | Detail |
| CX1g005331 | 1:7,568,911-7,572,420 | + | C1H1g30013 | C2H1g19003 | LOC_Os01g15000 | Os01g0253900 | - | Detail |
| CX1g001725 | 1:7,585,354-7,594,007 | - | C1H1g19940 | C2H1g02784 | LOC_Os01g15020 | Os01g0254100 | - | Detail |
| CX1g000900 | 1:7,608,946-7,609,215 | - | C1H1g26582 | C2H1g13097 | LOC_Os01g15029 | Os01g0254200 | - | Detail |
| CX1g004588 | 1:7,612,000-7,615,200 | - | C1H1g03143 | C2H1g18802 | LOC_Os01g15039 | Os01g0254300 | - | Detail |
| CX1g003840 | 1:7,619,337-7,619,990 | + | C1H1g10601 | C2H1g03871 | LOC_Os01g15060 | Os01g0254400 | - | Detail |
| CX1g002954 | 1:7,624,067-7,624,639 | - | C1H1g10601 | C2H1g29201 | LOC_Os01g15060 | Os01g0254850 | - | Detail |
| CX1g002064 | 1:7,626,757-7,630,138 | - | C1H1g29530 | C2H1g10250 | LOC_Os01g15110 | Os01g0254900 | OsSYP22 | Detail |
| CX1g004642 | 1:7,637,765-7,640,592 | + | C1H1g07953 | C2H1g19697 | LOC_Os01g15120 | Os01g0255000 | - | Detail |
| CX1g000415 | 1:7,642,515-7,643,868 | + | C1H1g19334 | C2H1g19369 | LOC_Os01g15130 | Os01g0255100 | - | Detail |
| CX1g001806 | 1:7,653,185-7,655,675 | + | - | C2H1g02996 | LOC_Os01g15250 | Os01g0256300 | - | Detail |
| CX1g002773 | 1:7,668,699-7,670,207 | - | - | C2H1g02996 | LOC_Os01g15250 | Os01g0256300 | - | Detail |
| CX1g006760 | 1:7,676,006-7,676,847 | + | C1H1g24551 | C2H1g05193 | LOC_Os01g15260 | Os01g0256400 | - | Detail |