| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015654 | 12:5,371,239-5,374,238 | + | C1H12g28699 | C2H12g10554 | LOC_Os12g12010 | Os12g0221700 | - | Detail |
| CX12g018329 | 12:5,383,927-5,384,091 | - | - | - | - | Os07g0578050 | - | Detail |
| CX12g015769 | 12:5,395,744-5,396,247 | + | - | - | - | Os12g0440300 | - | Detail |
| CX12g016711 | 12:5,407,694-5,407,963 | + | - | - | LOC_Os12g12090 | Os12g0222300 | - | Detail |
| CX12g016615 | 12:5,420,297-5,420,518 | - | - | - | LOC_Os12g12115 | Os12g0222650 | - | Detail |
| CX12g015591 | 12:5,424,793-5,427,090 | + | C1H12g26433 | C2H12g20945 | LOC_Os12g12130 | Os12g0222900 | - | Detail |
| CX12g015104 | 12:5,438,269-5,439,894 | + | C1H12g04247 | C2H12g21896 | LOC_Os12g12170 | Os12g0223300 | - | Detail |
| CX12g017983 | 12:5,445,529-5,446,002 | - | - | - | LOC_Os12g12190 | Os02g0789700 | - | Detail |
| CX12g015721 | 12:5,446,003-5,446,398 | - | - | C2H11g01867 | LOC_Os12g12190 | Os02g0789700 | - | Detail |
| CX12g018103 | 12:5,451,401-5,451,556 | - | - | - | - | - | - | Detail |
| CX12g016364 | 12:5,461,904-5,463,378 | + | C1H12g11389 | C2H12g04690 | LOC_Os12g12230 | Os12g0223700 | - | Detail |
| CX12g018383 | 12:5,466,215-5,466,418 | - | - | - | - | Os01g0111300 | - | Detail |
| CX12g015147 | 12:5,470,822-5,474,604 | - | C1H12g11200 | C2H12g20015 | LOC_Os12g12260 | Os12g0224000 | - | Detail |
| CX12g017602 | 12:5,479,663-5,480,814 | + | C1H12g08161 | C2H4g07739 | LOC_Os01g57250 | Os01g0780900 | qTGW1.2a | Detail |
| CX12g016954 | 12:5,492,723-5,494,081 | - | C1H12g16489 | C2H12g25147 | LOC_Os12g12290 | Os12g0224400 | - | Detail |
| CX12g016952 | 12:5,499,123-5,501,741 | - | C1H12g06034 | C2H12g08364 | LOC_Os12g12300 | Os12g0224500 | - | Detail |
| CX12g018397 | 12:5,517,090-5,524,242 | - | C1H12g06995 | C2H12g19853 | LOC_Os12g12360 | Os12g0225100 | - | Detail |
| CX12g016289 | 12:5,526,802-5,530,516 | + | C1H12g12495 | C2H12g15241 | LOC_Os12g12370 | Os12g0225200 | - | Detail |
| CX12g017984 | 12:5,533,423-5,535,318 | - | C1H12g05918 | C2H12g06972 | LOC_Os12g12380 | Os12g0225300 | - | Detail |
| CX12g018552 | 12:5,626,909-5,627,774 | + | C1H12g08426 | C2H12g19673 | LOC_Os12g12600 | Os12g0227500 | - | Detail |