| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07934 | 3:32,405,851-32,407,559 | - | C1H3g30582 | CX3g028167 | LOC_Os03g62870 | Os03g0845700 | - | Detail |
| C2H3g24689 | 3:32,408,913-32,410,204 | - | - | - | - | - | - | Detail |
| C2H3g07789 | 3:32,438,493-32,445,145 | + | C1H3g06046 | CX3g027520 | LOC_Os03g62910 | Os03g0846400 | - | Detail |
| C2H3g25757 | 3:32,456,459-32,457,549 | - | - | - | LOC_Os03g62950 | Os03g0846900 | - | Detail |
| C2H3g14341 | 3:32,470,058-32,478,877 | + | - | - | LOC_Os03g63010 | Os03g0847500 | - | Detail |
| C2H3g13863 | 3:32,483,031-32,487,997 | + | C1H3g07662 | CX3g025569 | LOC_Os03g63020 | Os03g0847600 | - | Detail |
| C2H3g03465 | 3:32,491,368-32,496,796 | + | C1H3g18227 | CX3g030304 | LOC_Os03g63040 | Os03g0847800 | - | Detail |
| C2H3g04348 | 3:32,501,703-32,502,305 | + | C1H3g18477 | CX3g027249 | LOC_Os03g63060 | Os03g0847900 | - | Detail |
| C2H3g21474 | 3:32,504,813-32,508,143 | - | C1H3g04389 | CX3g030785 | LOC_Os03g63074 | Os03g0848100 | - | Detail |
| C2H3g05478 | 3:32,509,090-32,511,621 | - | C1H3g15296 | CX3g028645 | LOC_Os03g63074 | Os03g0848200 | OsPHY1 | Detail |
| C2H3g28774 | 3:32,513,435-32,516,248 | + | C1H3g03652 | CX3g026033 | LOC_Os03g63090 | Os03g0848300 | - | Detail |
| C2H3g19380 | 3:32,517,184-32,520,240 | - | C1H3g28105 | CX3g025110 | LOC_Os03g63110 | Os03g0848400 | - | Detail |
| C2H3g29526 | 3:32,522,477-32,525,151 | + | C1H3g31410 | CX3g025723 | LOC_Os03g63140 | Os03g0848600 | - | Detail |
| C2H3g03590 | 3:32,526,754-32,532,617 | - | C1H3g23775 | CX3g030365 | LOC_Os03g63240 | Os03g0849500 | - | Detail |
| C2H3g13329 | 3:32,535,971-32,541,994 | - | C1H3g19612 | CX3g026100 | LOC_Os03g63250 | Os03g0849600 | - | Detail |
| C2H3g05145 | 3:32,545,167-32,548,724 | + | C1H3g10745 | CX3g026065 | LOC_Os03g63260 | Os03g0849700 | - | Detail |
| C2H3g18154 | 3:32,554,973-32,558,217 | + | C1H3g07018 | CX3g025001 | LOC_Os03g63270 | Os03g0849800 | - | Detail |
| C2H3g15124 | 3:32,564,913-32,566,699 | + | C1H3g00467 | CX3g027801 | LOC_Os03g63280 | Os03g0849900 | - | Detail |
| C2H3g05105 | 3:32,568,090-32,570,179 | - | C1H3g03350 | CX3g027870 | LOC_Os03g63290 | Os03g0850000 | - | Detail |
| C2H3g00770 | 3:32,570,713-32,575,172 | - | C1H3g26148 | CX3g027371 | LOC_Os03g63300 | Os03g0850100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |