| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03290 | 3:12,842,350-12,842,710 | - | - | - | - | - | - | Detail |
| C2H3g10191 | 3:12,850,682-12,854,416 | + | C1H3g05126 | CX3g029883 | LOC_Os03g25400 | Os03g0370000 | - | Detail |
| C2H3g30681 | 3:12,856,860-12,861,072 | + | C1H7g09543 | CX3g025282 | LOC_Os03g25420 | Os03g0370200 | - | Detail |
| C2H3g01146 | 3:12,873,841-12,875,804 | - | C1H3g27086 | CX3g026690 | LOC_Os03g25460 | Os03g0370600 | - | Detail |
| C2H3g30283 | 3:12,879,327-12,879,884 | + | - | - | LOC_Os03g25470 | Os03g0370800 | - | Detail |
| C2H3g00547 | 3:12,880,237-12,883,385 | + | C1H3g23354 | CX3g031102 | LOC_Os03g25480 | Os03g0370900 | - | Detail |
| C2H3g19651 | 3:12,886,574-12,888,839 | + | C1H3g05051 | CX3g027113 | LOC_Os03g25490 | Os03g0371000 | - | Detail |
| C2H3g04381 | 3:12,895,170-12,900,255 | + | C1H3g00840 | CX3g027113 | LOC_Os03g25500 | Os03g0371300 | - | Detail |
| C2H3g15015 | 3:12,900,679-12,901,104 | + | C1H3g21806 | CX3g031102 | LOC_Os03g25490 | Os03g0370900 | - | Detail |
| C2H3g00617 | 3:12,916,267-12,917,663 | - | C1H3g16595 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C2H3g13066 | 3:12,950,028-12,958,451 | + | C1H3g09237 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C2H3g24461 | 3:12,960,944-12,961,547 | - | C1H3g20988 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C2H3g09558 | 3:12,963,888-12,967,217 | + | C1H3g26671 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C2H3g30423 | 3:12,991,252-12,995,111 | - | C1H3g02459 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C2H3g09363 | 3:12,999,642-13,003,631 | + | C1H3g03430 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C2H3g02420 | 3:13,004,759-13,007,289 | - | C1H3g29992 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C2H3g06785 | 3:13,017,921-13,019,872 | - | C1H3g04281 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C2H3g13807 | 3:13,024,500-13,029,718 | + | C1H3g12991 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C2H3g07823 | 3:13,036,024-13,036,503 | - | C1H3g11329 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C2H3g01665 | 3:13,043,224-13,043,499 | + | - | - | LOC_Os03g25830 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |