| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15747 | 2:21,482,074-21,482,608 | - | C1H2g14085 | - | LOC_Os02g37800 | Os02g0590400 | - | Detail |
| C2H2g10765 | 2:21,483,895-21,486,325 | - | C1H2g14085 | - | LOC_Os02g37800 | Os02g0590400 | - | Detail |
| C2H2g30011 | 2:21,502,058-21,502,700 | + | C1H2g07069 | - | - | Os02g0590700 | - | Detail |
| C2H2g09101 | 2:21,503,848-21,508,756 | - | C1H2g12411 | CX2g022766 | LOC_Os02g37830 | Os02g0590800 | OsNek6 | Detail |
| C2H2g15922 | 2:21,549,720-21,553,147 | + | C1H2g28871 | CX2g019260 | LOC_Os02g37850 | Os02g0591500 | OSD1 | Detail |
| C2H2g27397 | 2:21,555,017-21,563,235 | - | C1H2g00397 | CX2g024590 | LOC_Os02g37856 | Os02g0591600 | - | Detail |
| C2H2g11275 | 2:21,565,331-21,566,957 | - | C1H2g26007 | CX2g019487 | LOC_Os02g37862 | Os02g0591700 | - | Detail |
| C2H2g21804 | 2:21,568,245-21,570,873 | - | C1H2g30702 | CX2g022457 | LOC_Os02g37870 | Os02g0591800 | - | Detail |
| C2H2g01719 | 2:21,576,159-21,581,179 | + | C1H2g18118 | CX2g024237 | LOC_Os02g37880 | Os02g0591900 | - | Detail |
| C2H2g25613 | 2:21,589,877-21,591,078 | - | C1H2g15312 | CX2g022275 | LOC_Os02g37890 | Os02g0592000 | - | Detail |
| C2H2g24155 | 2:21,591,927-21,596,178 | - | C1H2g27123 | CX2g023971 | LOC_Os02g37910 | Os02g0592200 | - | Detail |
| C2H2g30097 | 2:21,598,398-21,604,959 | - | C1H2g00585 | CX2g021962 | LOC_Os02g37920 | Os02g0592300 | OsPMS1 | Detail |
| C2H2g19116 | 2:21,608,288-21,610,633 | + | C1H2g24188 | CX2g018877 | LOC_Os02g37930 | Os02g0592400 | - | Detail |
| C2H2g25858 | 2:21,611,585-21,614,167 | - | C1H2g18659 | CX2g020482 | LOC_Os02g37940 | Os02g0592500 | - | Detail |
| C2H2g03437 | 2:21,614,763-21,618,957 | + | C1H2g07685 | CX2g019235 | LOC_Os02g37950 | Os02g0592600 | - | Detail |
| C2H2g12810 | 2:21,622,538-21,623,177 | - | C1H2g29428 | CX2g021639 | LOC_Os02g37970 | Os02g0592833 | OsFLZ5 | Detail |
| C2H2g28811 | 2:21,631,220-21,637,526 | - | C1H2g00636 | CX2g022606 | LOC_Os02g38010 | Os02g0593100 | - | Detail |
| C2H2g27699 | 2:21,638,125-21,638,349 | - | C1H2g16543 | CX2g022606 | - | Os02g0593100 | - | Detail |
| C2H2g02538 | 2:21,643,120-21,645,962 | + | C1H2g02941 | CX2g020754 | LOC_Os02g38020 | Os02g0593500 | - | Detail |
| C2H2g07587 | 2:21,647,238-21,647,638 | - | C1H2g00528 | CX2g020428 | LOC_Os02g38029 | Os02g0593400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |