| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16254 | 2:28,968,825-28,970,596 | + | C2H2g08856 | CX2g024490 | LOC_Os02g51660 | Os02g0752600 | - | Detail |
| C1H2g00963 | 2:28,999,405-29,002,626 | + | C2H2g08284 | CX2g021449 | LOC_Os02g51680 | Os02g0753000 | - | Detail |
| C1H2g18992 | 2:29,009,796-29,011,888 | + | C2H2g25596 | CX2g018924 | LOC_Os02g51700 | Os02g0753200 | - | Detail |
| C1H2g26243 | 2:29,012,717-29,013,366 | + | C2H2g02815 | CX2g018987 | LOC_Os02g51710 | Os02g0753300 | - | Detail |
| C1H2g30879 | 2:29,021,437-29,024,498 | - | C2H2g30533 | CX2g019204 | LOC_Os02g51730 | Os02g0753500 | - | Detail |
| C1H2g24008 | 2:29,032,633-29,034,925 | - | C2H2g21591 | CX2g020004 | LOC_Os02g51750 | Os02g0753800 | ANN2, OsANN2 | Detail |
| C1H2g30887 | 2:29,043,524-29,046,258 | + | C2H2g30548 | CX2g020182 | LOC_Os02g51760 | Os02g0753900 | - | Detail |
| C1H2g24939 | 2:29,046,871-29,050,201 | + | C2H2g08318 | CX2g020194 | LOC_Os02g51770 | Os02g0754000 | - | Detail |
| C1H2g05832 | 2:29,050,934-29,055,297 | - | C2H2g21614 | CX2g024338 | LOC_Os02g51780 | Os02g0754100 | - | Detail |
| C1H2g15781 | 2:29,057,111-29,058,539 | + | C2H2g19225 | CX2g019527 | LOC_Os02g51790 | Os02g0754300 | - | Detail |
| C1H2g31446 | 2:29,061,881-29,063,865 | - | C2H2g08622 | CX2g021972 | LOC_Os02g51799 | Os02g0754400 | Os2R_MYB31 | Detail |
| C1H2g12325 | 2:29,076,841-29,084,709 | + | C2H2g03959 | CX2g020141 | LOC_Os02g51810 | Os02g0754500 | OM64 | Detail |
| C1H2g07702 | 2:29,085,043-29,086,432 | + | C2H2g24256 | CX2g020843 | LOC_Os02g51820 | Os02g0754600 | - | Detail |
| C1H2g01909 | 2:29,086,632-29,091,708 | - | C2H2g22795 | CX2g020955 | LOC_Os02g51830 | Os02g0754700 | - | Detail |
| C1H2g27515 | 2:29,093,263-29,095,457 | + | C2H2g17343 | CX2g019973 | LOC_Os02g51840 | Os02g0754800 | - | Detail |
| C1H2g28331 | 2:29,096,591-29,099,056 | - | C2H2g07883 | CX2g022594 | LOC_Os02g51850 | Os02g0754900 | - | Detail |
| C1H2g20999 | 2:29,106,198-29,107,776 | - | C2H2g17447 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C1H2g15196 | 2:29,109,364-29,114,747 | - | C2H2g23797 | CX2g022833 | LOC_Os02g51860 | Os02g0755000 | OsTSD2 | Detail |
| C1H2g30118 | 2:29,127,474-29,133,457 | + | C2H2g07992 | CX2g023524 | LOC_Os02g51890 | Os02g0755400 | - | Detail |
| C1H2g05375 | 2:29,134,036-29,135,583 | - | C2H2g18444 | CX2g020690 | LOC_Os02g51900 | Os02g0755500 | UGT85E1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |