| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g14488 | 1:6,955,731-6,962,195 | + | C2H1g17215 | CX1g005556 | LOC_Os01g13730 | Os01g0238900 | - | Detail |
| C1H1g14591 | 1:6,963,950-6,969,619 | - | C2H1g24808 | CX1g007100 | LOC_Os01g13740 | Os01g0239000 | OsGLK2 | Detail |
| C1H1g15330 | 1:6,984,350-6,989,331 | + | C2H1g12393 | CX1g006141 | LOC_Os01g13760 | Os01g0239100 | - | Detail |
| C1H1g10674 | 1:6,996,395-7,000,575 | - | C2H1g30390 | CX1g003377 | LOC_Os01g13770 | Os01g0239200 | TPT | Detail |
| C1H1g29806 | 1:7,019,303-7,023,134 | + | C2H1g05246 | CX1g003032 | LOC_Os01g13800 | Os01g0239700 | - | Detail |
| C1H1g14821 | 1:7,049,542-7,050,345 | + | C2H1g17922 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g26893 | 1:7,050,411-7,050,985 | + | C2H1g04288 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g22711 | 1:7,059,594-7,060,586 | + | C2H1g22442 | CX1g002448 | LOC_Os01g13880 | Os01g0302900 | - | Detail |
| C1H1g13790 | 1:7,069,726-7,071,459 | + | C2H1g01439 | CX1g003506 | LOC_Os01g13930 | Os01g0241000 | - | Detail |
| C1H1g16293 | 1:7,072,915-7,076,847 | - | C2H1g00102 | CX1g001602 | LOC_Os01g13940 | Os01g0241100 | - | Detail |
| C1H1g05433 | 1:7,097,406-7,098,101 | + | C2H1g07537 | CX1g005498 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g01093 | 1:7,098,236-7,099,231 | + | C2H1g07537 | CX1g000413 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g03627 | 1:7,102,286-7,105,038 | + | C2H1g23925 | CX1g001627 | LOC_Os01g14020 | Os01g0242300 | - | Detail |
| C1H1g31589 | 1:7,107,560-7,109,365 | - | C2H1g27390 | CX1g002990 | LOC_Os01g14040 | Os01g0242500 | - | Detail |
| C1H1g24637 | 1:7,111,503-7,117,219 | - | C2H1g18566 | CX1g001173 | LOC_Os01g14050 | Os01g0242600 | - | Detail |
| C1H1g21695 | 1:7,120,754-7,123,050 | + | C2H1g05181 | CX1g006070 | LOC_Os01g14070 | Os01g0242900 | - | Detail |
| C1H1g07595 | 1:7,124,775-7,126,706 | - | C2H1g29594 | CX1g002725 | LOC_Os01g14080 | Os01g0243000 | - | Detail |
| C1H1g05434 | 1:7,129,458-7,137,797 | + | C2H1g03298 | CX1g006119 | LOC_Os01g14090 | Os01g0243100 | - | Detail |
| C1H1g06150 | 1:7,138,858-7,144,104 | - | C2H1g23199 | CX1g001271 | LOC_Os01g14100 | Os01g0243200 | - | Detail |
| C1H1g06722 | 1:7,170,620-7,171,294 | - | C2H1g18066 | CX1g005084 | LOC_Os01g14130 | Os01g0243600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |