| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g18535 | 12:8,599,848-8,603,542 | - | C2H12g03927 | CX12g017377 | LOC_Os12g17880 | Os12g0277000 | - | Detail |
| C1H12g24761 | 12:8,640,341-8,645,737 | - | C2H12g28494 | CX12g017705 | LOC_Os12g17900 | Os12g0277400 | - | Detail |
| C1H12g06371 | 12:8,651,726-8,656,037 | + | C2H12g12318 | CX12g016191 | LOC_Os12g17910 | Os12g0277500 | - | Detail |
| C1H12g01376 | 12:8,663,798-8,664,169 | - | C2H12g11764 | CX12g018723 | LOC_Os12g17930 | Os12g0277900 | - | Detail |
| C1H12g09603 | 12:8,675,307-8,676,306 | - | C2H12g20076 | CX12g016247 | LOC_Os12g17950 | Os12g0277900 | - | Detail |
| C1H12g04705 | 12:8,687,683-8,689,252 | - | - | - | - | - | - | Detail |
| C1H12g22417 | 12:8,717,746-8,721,032 | - | C2H12g07192 | CX12g018234 | LOC_Os12g18070 | - | - | Detail |
| C1H12g24393 | 12:8,731,397-8,742,257 | - | C2H12g14594 | CX12g016938 | LOC_Os12g18110 | Os12g0278700 | - | Detail |
| C1H12g12740 | 12:8,750,884-8,758,742 | - | C2H12g02522 | CX12g017296 | LOC_Os12g18120 | Os12g0278800 | - | Detail |
| C1H12g06841 | 12:8,773,539-8,781,544 | + | C2H12g09689 | CX12g016351 | LOC_Os12g18140 | Os12g0279000 | - | Detail |
| C1H12g22097 | 12:8,783,663-8,793,817 | - | C2H12g26090 | CX12g018140 | LOC_Os12g18150 | Os12g0279100 | - | Detail |
| C1H12g00021 | 12:8,814,222-8,822,818 | - | C2H12g22060 | CX12g017706 | LOC_Os12g18200 | Os12g0279600 | - | Detail |
| C1H12g28480 | 12:8,871,174-8,872,544 | + | C2H12g06640 | CX12g016081 | LOC_Os12g18450 | Os12g0282400 | - | Detail |
| C1H12g12461 | 12:8,880,545-8,883,944 | - | C2H12g30569 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g08537 | 12:8,887,978-8,888,964 | - | C2H12g15312 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g11746 | 12:8,903,686-8,908,295 | + | C2H12g10872 | CX12g016617 | LOC_Os12g18360 | Os12g0281300 | Pi-ta | Detail |
| C1H12g17326 | 12:8,911,635-8,911,967 | + | C2H12g17710 | CX12g016617 | LOC_Os12g18220 | Os12g0280050 | - | Detail |
| C1H12g13301 | 12:8,940,516-8,945,908 | - | C2H12g22248 | CX12g016673 | LOC_Os12g18530 | Os12g0283100 | - | Detail |
| C1H12g10664 | 12:8,954,074-8,954,466 | + | - | - | - | - | - | Detail |
| C1H12g08210 | 12:9,014,705-9,021,118 | - | C2H12g13366 | CX12g018758 | LOC_Os12g18630 | Os12g0283800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |