| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g01191 | 9:8,524,219-8,525,711 | - | C2H9g18190 | CX9g056487 | LOC_Os09g16520 | Os09g0334600 | - | Detail |
| C1H9g02774 | 9:8,536,625-8,539,850 | + | C2H9g13074 | CX9g056154 | LOC_Os09g16700 | Os09g0334800 | - | Detail |
| C1H9g08185 | 9:8,541,093-8,543,450 | - | C2H9g08792 | CX9g056054 | LOC_Os09g16550 | Os09g0334900 | - | Detail |
| C1H9g06883 | 9:8,562,938-8,565,466 | + | C2H9g26718 | CX9g055556 | LOC_Os09g16590 | Os09g0339000 | - | Detail |
| C1H9g23315 | 9:8,602,795-8,603,007 | + | - | - | - | Os09g0337300 | - | Detail |
| C1H9g28326 | 9:8,603,579-8,605,104 | + | C2H9g22118 | CX9g057099 | LOC_Os09g16760 | Os09g0322500 | - | Detail |
| C1H9g18515 | 9:8,611,252-8,612,686 | - | C2H9g04132 | CX9g057743 | LOC_Os09g16780 | Os09g0337500 | - | Detail |
| C1H9g22857 | 9:8,624,181-8,625,497 | + | C2H9g14451 | CX9g054838 | LOC_Os09g16810 | Os09g0324400 | - | Detail |
| C1H9g24958 | 9:8,641,074-8,641,736 | - | - | - | - | - | - | Detail |
| C1H9g07048 | 9:8,654,054-8,655,247 | + | - | CX9g057414 | LOC_Os09g16870 | Os09g0338200 | - | Detail |
| C1H9g19456 | 9:8,659,848-8,662,252 | + | C2H9g04101 | CX9g056696 | LOC_Os09g16910 | Os09g0338400 | - | Detail |
| C1H9g20883 | 9:8,672,968-8,674,371 | + | C2H9g09110 | CX9g057549 | LOC_Os09g16920 | Os09g0338500 | OsSLD, OsCyb5 | Detail |
| C1H9g08141 | 9:8,709,547-8,712,095 | + | C2H9g13463 | CX9g055720 | LOC_Os09g16950 | Os09g0339000 | - | Detail |
| C1H9g30091 | 9:8,732,622-8,734,687 | + | C2H9g04370 | CX9g056957 | LOC_Os09g17110 | Os09g0341100 | - | Detail |
| C1H9g02588 | 9:8,782,205-8,784,757 | - | C2H9g23202 | CX9g056327 | - | - | - | Detail |
| C1H9g31668 | 9:8,792,424-8,792,676 | + | - | - | - | Os08g0208400 | - | Detail |
| C1H9g00124 | 9:8,820,791-8,822,159 | + | C2H1g17996 | CX1g000494 | LOC_Os12g35900 | Os12g0169200 | - | Detail |
| C1H9g31626 | 9:8,827,700-8,829,083 | - | - | - | - | - | - | Detail |
| C1H9g00032 | 9:8,834,841-8,836,027 | - | C2H9g27875 | CX9g057496 | LOC_Os09g17560 | Os09g0344500 | OsASMT1 | Detail |
| C1H9g28403 | 9:8,837,093-8,839,480 | - | C2H9g04011 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |