| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g07347 | 9:1,075,156-1,085,201 | + | C2H9g26480 | CX9g054967 | LOC_Os09g02650 | Os09g0528000 | - | Detail |
| C1H9g03857 | 9:1,089,890-1,090,900 | - | C2H9g22556 | CX9g056772 | - | Os09g0114700 | - | Detail |
| C1H9g05497 | 9:1,094,971-1,099,710 | - | C2H9g22389 | CX9g054860 | LOC_Os09g02670 | Os09g0114700 | - | Detail |
| C1H9g29836 | 9:1,141,660-1,146,679 | - | C2H9g29266 | CX9g055947 | LOC_Os09g02700 | Os09g0115400 | - | Detail |
| C1H9g07917 | 9:1,149,484-1,153,068 | - | C2H9g16838 | CX9g056825 | LOC_Os09g02710 | Os09g0115500 | - | Detail |
| C1H9g16164 | 9:1,154,820-1,159,543 | - | C2H9g13076 | CX9g055750 | LOC_Os09g02729 | Os09g0115600 | - | Detail |
| C1H9g08981 | 9:1,160,792-1,161,404 | + | C2H9g18574 | - | - | - | - | Detail |
| C1H9g28466 | 9:1,162,521-1,163,458 | + | C2H9g25985 | CX9g054999 | LOC_Os09g02770 | Os09g0115900 | - | Detail |
| C1H9g21332 | 9:1,190,758-1,196,124 | - | C2H9g23279 | CX9g055162 | LOC_Os09g02790 | Os09g0116050 | - | Detail |
| C1H9g29492 | 9:1,211,177-1,223,638 | + | C2H9g04644 | CX9g056724 | LOC_Os09g02810 | Os09g0116400 | - | Detail |
| C1H9g13392 | 9:1,302,265-1,306,703 | - | C2H9g11741 | CX9g057143 | LOC_Os09g03090 | Os09g0119100 | - | Detail |
| C1H9g28426 | 9:1,346,681-1,350,359 | + | C2H9g21669 | CX9g057886 | LOC_Os09g03210 | Os09g0120100 | - | Detail |
| C1H9g22761 | 9:1,373,635-1,398,620 | + | C2H9g18201 | CX9g055691 | LOC_Os09g03370 | Os09g0121000 | OsSMC6 | Detail |
| C1H9g26557 | 9:1,435,834-1,437,305 | + | C2H9g13235 | CX9g057481 | LOC_Os09g03490 | Os09g0121900 | - | Detail |
| C1H9g10296 | 9:1,441,626-1,442,978 | + | C2H9g13516 | CX9g055867 | LOC_Os09g03500 | Os09g0122000 | - | Detail |
| C1H9g03152 | 9:1,485,882-1,488,548 | + | - | CX8g052323 | - | - | - | Detail |
| C1H9g12405 | 9:1,524,317-1,530,319 | + | C2H9g23970 | CX9g057056 | LOC_Os09g03600 | Os09g0123100 | - | Detail |
| C1H9g01360 | 9:1,536,490-1,545,479 | + | C2H9g12853 | CX9g057275 | LOC_Os09g03610 | Os09g0123200 | - | Detail |
| C1H9g19981 | 9:1,549,755-1,556,731 | + | C2H9g03310 | CX9g058087 | LOC_Os09g03620 | Os09g0123300 | - | Detail |
| C1H9g25910 | 9:1,557,502-1,558,296 | - | C2H9g23078 | - | - | Os09g0123400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |