| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g28547 | 6:3,971,728-3,973,312 | + | C2H6g02365 | CX6g043727 | LOC_Os06g09240 | Os06g0192100 | OsLSC6 | Detail |
| C1H6g31613 | 6:3,975,551-3,977,529 | - | C2H6g19960 | CX6g045845 | LOC_Os06g09270 | Os06g0192400 | - | Detail |
| C1H6g27949 | 6:3,984,223-3,991,608 | + | C2H6g04525 | CX6g045203 | LOC_Os06g09280 | Os06g0192500 | - | Detail |
| C1H6g04586 | 6:3,991,982-3,995,172 | + | C2H6g12013 | CX6g042459 | LOC_Os06g09290 | Os06g0192600 | OsRpt1a | Detail |
| C1H6g30948 | 6:4,013,269-4,016,386 | + | C2H6g17864 | CX6g045517 | LOC_Os06g09320 | Os06g0192900 | - | Detail |
| C1H6g10031 | 6:4,017,288-4,020,979 | - | C2H6g04615 | CX6g043243 | LOC_Os06g09330 | Os06g0193000 | - | Detail |
| C1H6g30180 | 6:4,027,173-4,029,872 | + | C2H6g26815 | CX6g045049 | LOC_Os06g09340 | Os06g0193200 | - | Detail |
| C1H6g07725 | 6:4,030,785-4,031,440 | - | C2H6g30543 | CX6g043220 | LOC_Os06g09350 | Os06g0193300 | - | Detail |
| C1H6g11807 | 6:4,037,468-4,049,174 | - | C2H6g03934 | CX6g041840 | LOC_Os06g09370 | Os06g0193400 | - | Detail |
| C1H6g29803 | 6:4,062,570-4,065,193 | + | C2H6g08826 | CX6g041880 | LOC_Os06g09390 | Os06g0194000 | - | Detail |
| C1H6g31722 | 6:4,086,354-4,087,864 | + | C2H6g02269 | CX6g042151 | LOC_Os06g09420 | Os06g0194400 | - | Detail |
| C1H6g01501 | 6:4,110,326-4,116,195 | - | C2H6g27649 | CX6g042634 | LOC_Os06g09450 | Os06g0194900 | - | Detail |
| C1H6g27044 | 6:4,125,888-4,136,186 | - | C2H6g14723 | CX6g045871 | LOC_Os06g09540 | Os06g0195600 | - | Detail |
| C1H6g05206 | 6:4,149,118-4,151,226 | + | C2H6g17745 | CX6g042315 | LOC_Os06g09560 | Os06g0195800 | - | Detail |
| C1H6g25687 | 6:4,153,545-4,155,575 | - | C2H6g02523 | CX6g045819 | LOC_Os06g09570 | Os06g0195900 | - | Detail |
| C1H6g00287 | 6:4,166,492-4,168,508 | - | C2H6g08432 | CX6g044294 | LOC_Os06g09610 | Os06g0196300 | - | Detail |
| C1H6g16774 | 6:4,170,211-4,173,666 | - | C2H6g19355 | CX6g045160 | LOC_Os06g09620 | Os06g0196500 | - | Detail |
| C1H6g19907 | 6:4,174,985-4,178,364 | - | C2H6g25460 | CX6g043725 | LOC_Os06g09630 | Os06g0196600 | OsKASI, KASI | Detail |
| C1H6g21683 | 6:4,188,283-4,195,314 | + | C2H6g18661 | CX6g045833 | LOC_Os06g09660 | Os06g0196700 | ARF16, OsARF16 | Detail |
| C1H6g17273 | 6:4,196,628-4,201,133 | + | C2H6g05851 | CX6g042131 | LOC_Os06g09679 | Os06g0197575 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002096 | 1:7,373,394-7,374,270 | - | C1H1g01215 | C2H1g16845 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| CX1g004154 | 1:7,378,008-7,378,870 | - | C1H1g04124 | C2H1g12724 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| CX1g002599 | 1:7,380,173-7,382,712 | - | C1H1g17472 | C2H1g16042 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| CX1g002390 | 1:7,388,520-7,389,458 | - | C1H1g11195 | C2H1g16396 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| CX1g004346 | 1:7,392,426-7,392,710 | - | - | - | - | - | - | Detail |
| CX1g001638 | 1:7,417,800-7,420,026 | - | - | C2H1g09557 | LOC_Os01g14750 | Os01g0249900 | - | Detail |
| CX1g001802 | 1:7,429,521-7,429,924 | + | C1H1g13841 | C2H1g22193 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| CX1g002364 | 1:7,434,175-7,444,739 | + | C1H1g29369 | C2H1g16588 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| CX1g003516 | 1:7,445,811-7,449,775 | + | C1H1g07075 | C2H1g02998 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| CX1g002093 | 1:7,450,943-7,455,220 | + | C1H1g01846 | C2H1g23142 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| CX1g006822 | 1:7,457,068-7,461,731 | + | C1H1g03276 | C2H1g30063 | LOC_Os01g14840 | Os01g0251200 | - | Detail |
| CX1g003895 | 1:7,462,724-7,462,969 | + | - | - | - | - | - | Detail |
| CX1g002550 | 1:7,468,154-7,468,555 | - | C1H1g02537 | C2H1g01673 | LOC_Os01g14850 | - | - | Detail |
| CX1g004714 | 1:7,484,596-7,484,769 | - | - | - | - | - | - | Detail |
| CX1g004567 | 1:7,497,280-7,499,790 | + | C1H1g04123 | C2H1g16208 | LOC_Os01g14860 | Os01g0252100 | - | Detail |
| CX1g005640 | 1:7,500,712-7,503,300 | + | C1H1g23778 | C2H1g17129 | LOC_Os01g14870 | Os01g0252200 | - | Detail |
| CX1g003089 | 1:7,504,035-7,504,268 | - | - | C2H1g11713 | LOC_Os01g14880 | Os01g0252300 | - | Detail |
| CX1g006443 | 1:7,506,411-7,507,629 | + | C1H1g04861 | C2H1g15296 | LOC_Os01g14890 | Os01g0252600 | - | Detail |
| CX1g002972 | 1:7,509,251-7,512,230 | + | C1H1g08330 | C2H1g06246 | LOC_Os01g14900 | Os01g0299300 | - | Detail |
| CX1g005803 | 1:7,517,707-7,521,157 | - | C1H1g21907 | C2H1g19089 | LOC_Os01g14920 | Os01g0252900 | - | Detail |