| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22575 | 1:38,228,264-38,230,711 | + | C2H1g13756 | CX1g003091 | LOC_Os01g74600 | Os01g0977400 | - | Detail |
| C1H1g07474 | 1:38,234,552-38,247,323 | - | C2H1g30278 | CX1g002702 | LOC_Os01g74610 | Os01g0977600 | - | Detail |
| C1H1g10757 | 1:38,251,328-38,252,363 | - | C2H1g08075 | CX1g002165 | LOC_Os01g74630 | Os01g0977901 | - | Detail |
| C1H1g31840 | 1:38,257,199-38,262,236 | - | C2H1g06471 | CX1g001384 | - | - | - | Detail |
| C1H1g26867 | 1:38,263,571-38,267,778 | + | C2H1g27116 | CX1g001353 | LOC_Os01g74640 | Os01g0978000 | OsUCP1 | Detail |
| C1H1g06588 | 1:38,269,207-38,274,575 | - | C2H1g18952 | CX1g004874 | LOC_Os01g74650 | Os01g0978100 | - | Detail |
| C1H1g16241 | 1:38,281,442-38,282,425 | + | C2H1g23413 | CX1g002707 | LOC_Os01g74660 | Os01g0978400 | - | Detail |
| C1H10g04037 | 10:33,350-33,760 | + | C2H10g06876 | - | - | - | - | Detail |
| C1H10g10615 | 10:34,209-46,905 | - | C2H10g10175 | CX10g007625 | LOC_Os10g01044 | Os10g0100300 | - | Detail |
| C1H10g12715 | 10:54,519-61,604 | + | C2H10g03638 | CX10g008235 | LOC_Os10g01060 | Os10g0100500 | - | Detail |
| C1H10g01786 | 10:129,604-130,545 | - | C2H10g03040 | CX10g009692 | LOC_Os10g01080 | Os10g0100700 | OsPDX1.2 | Detail |
| C1H10g00834 | 10:151,473-153,881 | + | C2H10g29939 | CX10g010378 | LOC_Os10g01100 | Os10g0101000 | SDRLK-44 | Detail |
| C1H10g23663 | 10:160,295-162,859 | - | C2H10g13492 | CX10g008057 | LOC_Os10g01110 | Os10g0101100 | - | Detail |
| C1H10g17975 | 10:171,468-173,534 | - | C2H10g26137 | CX10g009812 | LOC_Os10g01134 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| C1H10g24975 | 10:177,832-178,119 | - | C2H10g26137 | CX10g008057 | LOC_Os10g01110 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| C1H10g10888 | 10:226,282-227,340 | - | C2H10g06494 | CX10g010129 | LOC_Os10g01290 | Os10g0102400 | - | Detail |
| C1H10g10334 | 10:264,396-270,853 | + | C2H10g14615 | CX10g008814 | LOC_Os10g01380 | Os10g0102900 | - | Detail |
| C1H10g06516 | 10:283,832-286,877 | - | C2H10g02203 | CX10g010069 | LOC_Os10g06140 | Os10g0103140 | - | Detail |
| C1H10g15181 | 10:317,860-319,188 | - | C2H10g20902 | CX10g007797 | LOC_Os10g01470 | Os10g0103700 | - | Detail |
| C1H10g21883 | 10:336,702-342,737 | - | C2H10g05016 | CX10g008534 | LOC_Os10g01480 | Os10g0103800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015558 | 12:3,916,019-3,916,666 | + | C1H12g31126 | C2H12g05779 | - | - | - | Detail |
| CX12g017272 | 12:3,917,507-3,917,659 | + | - | - | - | - | - | Detail |
| CX12g017927 | 12:3,928,913-3,932,646 | + | C1H12g06877 | C2H12g27339 | LOC_Os12g08720 | Os12g0188500 | - | Detail |
| CX12g015690 | 12:3,940,022-3,940,754 | - | C1H12g15050 | C2H12g14380 | LOC_Os12g08730 | Os12g0188700 | OsTrxm | Detail |
| CX12g017298 | 12:3,942,750-3,947,735 | + | C1H12g05241 | C2H12g21980 | LOC_Os12g08740 | Os12g0188900 | - | Detail |
| CX12g017024 | 12:3,946,578-3,947,031 | - | C1H12g21808 | C2H12g01844 | - | Os12g0189100 | - | Detail |
| CX12g015280 | 12:3,980,140-3,983,746 | + | C1H12g16915 | C2H12g01367 | LOC_Os12g08760 | Os12g0189300 | - | Detail |
| CX12g018701 | 12:3,986,653-3,987,367 | + | C1H12g28974 | C2H12g03276 | LOC_Os12g08770 | Os12g0189400 | - | Detail |
| CX12g017300 | 12:3,997,353-3,999,132 | - | C1H12g04629 | C2H12g01795 | LOC_Os12g08780 | Os12g0189500 | OsYUC11, YUCCA11 | Detail |
| CX12g016125 | 12:4,006,684-4,007,379 | + | - | - | LOC_Os12g08790 | Os12g0189700 | - | Detail |
| CX12g018088 | 12:4,020,838-4,024,663 | + | C1H12g25775 | C2H12g08940 | LOC_Os12g08800 | Os12g0189900 | - | Detail |
| CX12g017476 | 12:4,025,501-4,028,909 | - | C1H12g13538 | C2H12g15639 | LOC_Os12g08810 | Os12g0190000 | - | Detail |
| CX12g015305 | 12:4,033,810-4,034,038 | + | - | - | - | - | - | Detail |
| CX12g015669 | 12:4,042,166-4,046,440 | + | C1H12g06109 | C2H12g19857 | LOC_Os12g08820 | Os12g0190100 | - | Detail |
| CX12g016118 | 12:4,047,499-4,049,142 | - | C1H12g18735 | C2H12g19884 | LOC_Os12g08830 | Os12g0190200 | - | Detail |
| CX12g017205 | 12:4,062,674-4,063,919 | + | C1H6g10318 | C2H2g18407 | LOC_Os06g34670 | - | - | Detail |
| CX12g016245 | 12:4,067,138-4,070,669 | - | C1H12g28925 | C2H12g19779 | LOC_Os12g08850 | Os12g0190400 | - | Detail |
| CX12g018106 | 12:4,089,347-4,089,575 | - | - | - | - | - | - | Detail |
| CX12g016877 | 12:4,104,648-4,107,247 | + | C1H12g03417 | C2H12g16869 | LOC_Os12g08900 | Os12g0191300 | - | Detail |
| CX12g018438 | 12:4,110,158-4,110,307 | - | - | - | - | - | - | Detail |