| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g26201 | 2:26,028,509-26,029,054 | - | C1H2g13888 | CX2g019053 | LOC_Os02g46180 | Os02g0686800 | OsFLZ6 | Detail |
| C2H2g16274 | 2:26,034,280-26,034,860 | - | C1H2g12372 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| C2H2g14907 | 2:26,041,294-26,041,764 | - | C1H2g24380 | CX2g019053 | LOC_Os02g46210 | Os02g0687200 | - | Detail |
| C2H2g20705 | 2:26,045,961-26,047,655 | - | C1H2g04645 | CX2g021886 | LOC_Os02g46220 | Os02g0687500 | - | Detail |
| C2H2g00232 | 2:26,077,015-26,081,748 | + | C1H2g29911 | - | - | - | - | Detail |
| C2H2g13045 | 2:26,082,144-26,086,642 | + | C1H2g04440 | CX2g023420 | LOC_Os02g46260 | Os02g0687900 | - | Detail |
| C2H2g01015 | 2:26,094,387-26,095,660 | + | C1H2g30839 | CX2g022794 | LOC_Os02g46290 | Os02g0688200 | OsPMEI10 | Detail |
| C2H2g06836 | 2:26,099,955-26,103,951 | + | C1H2g22768 | CX2g020423 | LOC_Os02g46320 | Os02g0688500 | - | Detail |
| C2H2g30648 | 2:26,114,025-26,115,146 | + | C1H2g26668 | CX2g022922 | LOC_Os02g46340 | Os02g0178600 | - | Detail |
| C2H2g27543 | 2:26,118,987-26,123,313 | - | C1H2g06477 | CX2g024866 | LOC_Os02g46350 | Os02g0688900 | - | Detail |
| C2H2g00766 | 2:26,135,147-26,135,710 | + | C1H2g08174 | CX2g019959 | LOC_Os02g46360 | Os02g0689000 | OsPMEI11 | Detail |
| C2H2g23851 | 2:26,144,600-26,145,075 | - | - | - | - | Os02g0689066 | - | Detail |
| C2H2g20781 | 2:26,151,534-26,153,769 | + | C1H2g12636 | CX2g022764 | LOC_Os02g46380 | Os02g0689200 | PUP11, PUP11-1 | Detail |
| C2H2g03281 | 2:26,163,050-26,163,913 | - | - | CX2g022882 | LOC_Os02g46420 | Os02g0689500 | - | Detail |
| C2H2g05419 | 2:26,173,037-26,174,023 | + | C1H2g20810 | - | LOC_Os02g44040 | Os02g0689600 | - | Detail |
| C2H2g08672 | 2:26,174,833-26,175,378 | - | - | CX2g020237 | LOC_Os02g46440 | Os02g0689700 | - | Detail |
| C2H2g07696 | 2:26,178,818-26,192,602 | - | C1H2g28370 | CX2g022494 | LOC_Os02g46450 | Os02g0689800 | OsCHR709, CHR709 | Detail |
| C2H2g09965 | 2:26,197,539-26,199,839 | - | C1H2g09545 | CX2g023508 | LOC_Os02g46460 | Os02g0689900 | OsNPF7.9 | Detail |
| C2H2g07155 | 2:26,200,125-26,200,415 | - | C1H2g11268 | CX2g023508 | LOC_Os02g46460 | Os02g0689900 | OsNPF7.9 | Detail |
| C2H2g30109 | 2:26,203,160-26,206,799 | - | - | CX2g022322 | - | Os02g0690000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016892 | 12:3,744,642-3,747,496 | - | C1H12g26935 | C2H12g00531 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| CX12g017341 | 12:3,756,279-3,757,543 | - | C1H12g24025 | C2H12g26846 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| CX12g015845 | 12:3,766,908-3,767,057 | + | - | - | - | Os01g0728000 | - | Detail |
| CX12g015947 | 12:3,768,429-3,770,059 | + | C1H12g30820 | C2H12g15436 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g016463 | 12:3,781,263-3,782,871 | - | C1H12g24779 | C2H12g22492 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g018168 | 12:3,792,466-3,792,624 | - | - | - | - | Os01g0612350 | - | Detail |
| CX12g017419 | 12:3,801,788-3,803,542 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g08140 | Os12g0181900 | - | Detail |
| CX12g017548 | 12:3,810,428-3,814,915 | - | C1H12g10186 | C2H12g19835 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| CX12g017738 | 12:3,817,039-3,820,573 | - | C1H12g04557 | C2H12g22418 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| CX12g017737 | 12:3,827,312-3,827,854 | + | - | - | LOC_Os12g08200 | Os12g0182500 | - | Detail |
| CX12g016669 | 12:3,830,361-3,831,806 | - | C1H12g20756 | C2H12g16765 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| CX12g016799 | 12:3,833,357-3,836,720 | + | C1H12g24787 | C2H12g28848 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| CX12g015810 | 12:3,838,743-3,840,547 | + | C1H12g14015 | C2H12g00347 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| CX12g015556 | 12:3,842,955-3,846,495 | + | C1H12g08117 | C2H12g26410 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| CX12g017411 | 12:3,846,776-3,849,565 | - | C1H12g30783 | C2H12g20510 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| CX12g016591 | 12:3,850,024-3,852,733 | - | C1H12g15428 | C2H12g06987 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| CX12g017966 | 12:3,870,752-3,871,255 | - | C1H12g08161 | C2H9g08238 | - | - | - | Detail |
| CX12g015405 | 12:3,878,630-3,881,461 | + | - | - | LOC_Os12g08670 | Os12g0187500 | - | Detail |
| CX12g017314 | 12:3,890,372-3,894,692 | - | C1H12g25360 | C2H12g09428 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| CX12g016900 | 12:3,913,908-3,915,565 | + | C1H12g07775 | C2H12g03496 | LOC_Os12g08710 | - | - | Detail |