| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g16706 | 9:6,408,574-6,419,462 | - | C1H9g08096 | CX9g055290 | LOC_Os09g12290 | Os09g0294000 | - | Detail |
| C2H9g19323 | 9:6,442,435-6,444,733 | - | C1H9g11895 | CX9g056129 | LOC_Os09g12310 | Os09g0294300 | - | Detail |
| C2H9g23060 | 9:6,465,252-6,465,937 | + | C1H9g15369 | CX9g056635 | LOC_Os09g12350 | - | - | Detail |
| C2H9g29911 | 9:6,468,636-6,469,337 | + | C1H9g15369 | CX9g056635 | LOC_Os09g12350 | - | - | Detail |
| C2H9g24980 | 9:6,472,713-6,474,170 | - | - | CX9g057157 | LOC_Os09g12380 | Os09g0295000 | - | Detail |
| C2H9g22784 | 9:6,478,558-6,478,749 | - | C1H9g24676 | - | LOC_Os09g11970 | - | - | Detail |
| C2H9g22964 | 9:6,486,770-6,488,760 | - | C1H9g14814 | - | LOC_Os09g12480 | - | - | Detail |
| C2H9g17607 | 9:6,520,725-6,525,311 | + | C1H9g09868 | CX9g055369 | LOC_Os09g12500 | Os09g0296400 | - | Detail |
| C2H9g14588 | 9:6,526,696-6,527,286 | + | C1H9g28667 | CX9g055393 | LOC_Os09g12510 | Os09g0296500 | - | Detail |
| C2H9g07479 | 9:6,528,774-6,530,186 | + | C1H9g22275 | CX9g057641 | - | - | - | Detail |
| C2H9g28255 | 9:6,532,658-6,535,500 | + | C1H9g04248 | CX9g057610 | LOC_Os09g12530 | Os09g0296700 | - | Detail |
| C2H9g16228 | 9:6,537,764-6,540,483 | + | C1H9g21187 | CX9g056490 | LOC_Os09g12540 | Os09g0296800 | OsLhcb7 | Detail |
| C2H9g17110 | 9:6,542,922-6,547,433 | + | C1H9g06139 | CX9g056084 | LOC_Os09g12550 | Os09g0296900 | HSLG2 | Detail |
| C2H9g04106 | 9:6,549,987-6,556,917 | + | C1H9g10693 | CX9g058097 | LOC_Os09g12560 | Os09g0297000 | FC1 | Detail |
| C2H9g24691 | 9:6,557,357-6,560,561 | - | C1H9g27717 | CX9g054933 | LOC_Os09g12570 | Os09g0297100 | - | Detail |
| C2H9g06399 | 9:6,563,844-6,565,415 | + | - | CX9g054925 | LOC_Os09g12590 | Os09g0297300 | OsSTP24 | Detail |
| C2H9g07019 | 9:6,568,794-6,572,094 | - | C1H9g22827 | CX9g058188 | LOC_Os09g12600 | Os09g0297400 | PPT1, OsPPT1 | Detail |
| C2H9g08238 | 9:6,579,050-6,580,149 | + | - | CX9g057576 | - | - | - | Detail |
| C2H9g10281 | 9:6,580,292-6,580,881 | - | C1H9g17081 | CX9g054945 | LOC_Os09g12620 | Os09g0297800 | - | Detail |
| C2H9g19494 | 9:6,581,791-6,582,483 | - | C1H9g28667 | CX9g057472 | LOC_Os09g12630 | Os09g0297900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016892 | 12:3,744,642-3,747,496 | - | C1H12g26935 | C2H12g00531 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| CX12g017341 | 12:3,756,279-3,757,543 | - | C1H12g24025 | C2H12g26846 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| CX12g015845 | 12:3,766,908-3,767,057 | + | - | - | - | Os01g0728000 | - | Detail |
| CX12g015947 | 12:3,768,429-3,770,059 | + | C1H12g30820 | C2H12g15436 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g016463 | 12:3,781,263-3,782,871 | - | C1H12g24779 | C2H12g22492 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g018168 | 12:3,792,466-3,792,624 | - | - | - | - | Os01g0612350 | - | Detail |
| CX12g017419 | 12:3,801,788-3,803,542 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g08140 | Os12g0181900 | - | Detail |
| CX12g017548 | 12:3,810,428-3,814,915 | - | C1H12g10186 | C2H12g19835 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| CX12g017738 | 12:3,817,039-3,820,573 | - | C1H12g04557 | C2H12g22418 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| CX12g017737 | 12:3,827,312-3,827,854 | + | - | - | LOC_Os12g08200 | Os12g0182500 | - | Detail |
| CX12g016669 | 12:3,830,361-3,831,806 | - | C1H12g20756 | C2H12g16765 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| CX12g016799 | 12:3,833,357-3,836,720 | + | C1H12g24787 | C2H12g28848 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| CX12g015810 | 12:3,838,743-3,840,547 | + | C1H12g14015 | C2H12g00347 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| CX12g015556 | 12:3,842,955-3,846,495 | + | C1H12g08117 | C2H12g26410 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| CX12g017411 | 12:3,846,776-3,849,565 | - | C1H12g30783 | C2H12g20510 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| CX12g016591 | 12:3,850,024-3,852,733 | - | C1H12g15428 | C2H12g06987 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| CX12g017966 | 12:3,870,752-3,871,255 | - | C1H12g08161 | C2H9g08238 | - | - | - | Detail |
| CX12g015405 | 12:3,878,630-3,881,461 | + | - | - | LOC_Os12g08670 | Os12g0187500 | - | Detail |
| CX12g017314 | 12:3,890,372-3,894,692 | - | C1H12g25360 | C2H12g09428 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| CX12g016900 | 12:3,913,908-3,915,565 | + | C1H12g07775 | C2H12g03496 | LOC_Os12g08710 | - | - | Detail |