| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02801 | 1:22,781,895-22,783,760 | + | C1H1g02990 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C2H1g14029 | 1:22,800,599-22,804,042 | + | C1H1g03527 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g03825 | 1:22,806,305-22,807,773 | + | C1H1g07657 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g05065 | 1:22,812,063-22,818,989 | - | C1H1g22176 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C2H1g18946 | 1:22,832,565-22,835,056 | - | C1H1g27414 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C2H1g07403 | 1:22,844,565-22,848,440 | + | C1H1g00331 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C2H1g02176 | 1:22,850,866-22,853,732 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g26854 | 1:22,854,799-22,862,607 | - | C1H1g21121 | CX1g006855 | LOC_Os01g44990 | Os01g0636700 | OsCHR745, CHR745 | Detail |
| C2H1g21987 | 1:22,872,357-22,877,333 | - | C1H1g23587 | CX1g002420 | LOC_Os01g45020 | Os01g0637100 | - | Detail |
| C2H1g25141 | 1:22,894,595-22,896,402 | - | - | CX1g003226 | LOC_Os01g45040 | Os01g0637300 | - | Detail |
| C2H1g19088 | 1:22,902,539-22,906,552 | + | C1H1g00331 | CX1g001605 | LOC_Os01g45060 | Os01g0637500 | OsPG3 | Detail |
| C2H1g22263 | 1:22,908,608-22,911,930 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g15078 | 1:22,915,510-22,916,308 | + | C1H1g21245 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| C2H1g07012 | 1:22,958,679-22,959,299 | + | C1H1g25999 | CX1g003479 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| C2H1g28691 | 1:22,969,162-22,972,367 | + | C1H1g28061 | CX1g000740 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| C2H1g30211 | 1:22,973,098-22,976,456 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g06985 | 1:22,978,466-22,979,033 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g17536 | 1:23,015,736-23,024,618 | + | C1H1g11479 | CX1g002383 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |
| C2H1g27294 | 1:23,027,541-23,031,034 | + | C1H1g17843 | CX1g007210 | LOC_Os01g45290 | Os01g0640000 | - | Detail |
| C2H1g21978 | 1:23,032,721-23,038,389 | - | C1H1g22957 | CX1g000695 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016892 | 12:3,744,642-3,747,496 | - | C1H12g26935 | C2H12g00531 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| CX12g017341 | 12:3,756,279-3,757,543 | - | C1H12g24025 | C2H12g26846 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| CX12g015845 | 12:3,766,908-3,767,057 | + | - | - | - | Os01g0728000 | - | Detail |
| CX12g015947 | 12:3,768,429-3,770,059 | + | C1H12g30820 | C2H12g15436 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g016463 | 12:3,781,263-3,782,871 | - | C1H12g24779 | C2H12g22492 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g018168 | 12:3,792,466-3,792,624 | - | - | - | - | Os01g0612350 | - | Detail |
| CX12g017419 | 12:3,801,788-3,803,542 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g08140 | Os12g0181900 | - | Detail |
| CX12g017548 | 12:3,810,428-3,814,915 | - | C1H12g10186 | C2H12g19835 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| CX12g017738 | 12:3,817,039-3,820,573 | - | C1H12g04557 | C2H12g22418 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| CX12g017737 | 12:3,827,312-3,827,854 | + | - | - | LOC_Os12g08200 | Os12g0182500 | - | Detail |
| CX12g016669 | 12:3,830,361-3,831,806 | - | C1H12g20756 | C2H12g16765 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| CX12g016799 | 12:3,833,357-3,836,720 | + | C1H12g24787 | C2H12g28848 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| CX12g015810 | 12:3,838,743-3,840,547 | + | C1H12g14015 | C2H12g00347 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| CX12g015556 | 12:3,842,955-3,846,495 | + | C1H12g08117 | C2H12g26410 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| CX12g017411 | 12:3,846,776-3,849,565 | - | C1H12g30783 | C2H12g20510 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| CX12g016591 | 12:3,850,024-3,852,733 | - | C1H12g15428 | C2H12g06987 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| CX12g017966 | 12:3,870,752-3,871,255 | - | C1H12g08161 | C2H9g08238 | - | - | - | Detail |
| CX12g015405 | 12:3,878,630-3,881,461 | + | - | - | LOC_Os12g08670 | Os12g0187500 | - | Detail |
| CX12g017314 | 12:3,890,372-3,894,692 | - | C1H12g25360 | C2H12g09428 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| CX12g016900 | 12:3,913,908-3,915,565 | + | C1H12g07775 | C2H12g03496 | LOC_Os12g08710 | - | - | Detail |