| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13187 | 3:438,480-441,433 | + | C2H3g22613 | CX3g029421 | LOC_Os03g01930 | Os03g0109800 | - | Detail |
| C1H3g21853 | 3:445,789-446,607 | + | C2H3g20578 | CX3g026177 | LOC_Os03g01960 | Os03g0110300 | - | Detail |
| C1H3g18613 | 3:449,033-456,024 | + | C2H3g30307 | CX3g028468 | LOC_Os03g01970 | Os03g0110400 | - | Detail |
| C1H3g14106 | 3:456,701-461,545 | + | C2H3g29785 | CX3g031312 | LOC_Os03g01980 | Os03g0110500 | - | Detail |
| C1H3g04599 | 3:475,541-479,316 | + | C2H3g26504 | CX3g031295 | LOC_Os03g02010 | Os03g0110800 | DRM2, OsDRM2, osdrm2 | Detail |
| C1H3g23898 | 3:476,327-476,726 | - | C2H3g00862 | - | - | Os03g0110700 | - | Detail |
| C1H3g14665 | 3:476,908-477,130 | - | C2H3g03189 | - | - | - | - | Detail |
| C1H3g22432 | 3:479,801-481,981 | + | C2H3g24553 | CX3g029772 | LOC_Os03g02020 | Os03g0110900 | - | Detail |
| C1H3g02926 | 3:482,790-488,960 | - | C2H3g02060 | CX3g026446 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| C1H3g26294 | 3:490,235-492,891 | - | C2H3g10416 | CX3g031029 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| C1H3g15608 | 3:495,868-496,164 | - | C2H3g28715 | CX3g030230 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| C1H3g30842 | 3:502,839-503,892 | - | C2H3g08607 | CX3g026627 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| C1H3g02748 | 3:528,449-532,831 | - | C2H3g30326 | CX3g026774 | - | - | - | Detail |
| C1H3g19796 | 3:531,215-535,712 | + | C2H3g17363 | CX3g030709 | - | - | - | Detail |
| C1H3g18662 | 3:543,933-546,064 | + | - | CX3g030313 | LOC_Os03g02080 | Os03g0111500 | - | Detail |
| C1H3g03993 | 3:547,538-550,987 | - | C2H3g23362 | CX3g030989 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C1H3g17498 | 3:551,443-555,430 | - | - | CX3g030989 | LOC_Os03g02090 | Os03g0111600 | - | Detail |
| C1H3g12626 | 3:555,771-556,786 | + | C2H3g00134 | CX3g026803 | LOC_Os03g21740 | Os03g0111700 | - | Detail |
| C1H3g29372 | 3:558,458-562,649 | + | C2H3g00134 | CX3g029050 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| C1H3g12244 | 3:564,686-571,641 | + | C2H3g12317 | CX3g028048 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016892 | 12:3,744,642-3,747,496 | - | C1H12g26935 | C2H12g00531 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| CX12g017341 | 12:3,756,279-3,757,543 | - | C1H12g24025 | C2H12g26846 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| CX12g015845 | 12:3,766,908-3,767,057 | + | - | - | - | Os01g0728000 | - | Detail |
| CX12g015947 | 12:3,768,429-3,770,059 | + | C1H12g30820 | C2H12g15436 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g016463 | 12:3,781,263-3,782,871 | - | C1H12g24779 | C2H12g22492 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g018168 | 12:3,792,466-3,792,624 | - | - | - | - | Os01g0612350 | - | Detail |
| CX12g017419 | 12:3,801,788-3,803,542 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g08140 | Os12g0181900 | - | Detail |
| CX12g017548 | 12:3,810,428-3,814,915 | - | C1H12g10186 | C2H12g19835 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| CX12g017738 | 12:3,817,039-3,820,573 | - | C1H12g04557 | C2H12g22418 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| CX12g017737 | 12:3,827,312-3,827,854 | + | - | - | LOC_Os12g08200 | Os12g0182500 | - | Detail |
| CX12g016669 | 12:3,830,361-3,831,806 | - | C1H12g20756 | C2H12g16765 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| CX12g016799 | 12:3,833,357-3,836,720 | + | C1H12g24787 | C2H12g28848 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| CX12g015810 | 12:3,838,743-3,840,547 | + | C1H12g14015 | C2H12g00347 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| CX12g015556 | 12:3,842,955-3,846,495 | + | C1H12g08117 | C2H12g26410 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| CX12g017411 | 12:3,846,776-3,849,565 | - | C1H12g30783 | C2H12g20510 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| CX12g016591 | 12:3,850,024-3,852,733 | - | C1H12g15428 | C2H12g06987 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| CX12g017966 | 12:3,870,752-3,871,255 | - | C1H12g08161 | C2H9g08238 | - | - | - | Detail |
| CX12g015405 | 12:3,878,630-3,881,461 | + | - | - | LOC_Os12g08670 | Os12g0187500 | - | Detail |
| CX12g017314 | 12:3,890,372-3,894,692 | - | C1H12g25360 | C2H12g09428 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| CX12g016900 | 12:3,913,908-3,915,565 | + | C1H12g07775 | C2H12g03496 | LOC_Os12g08710 | - | - | Detail |