| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g10555 | 7:904,609-905,646 | - | C2H7g00627 | CX7g047815 | LOC_Os07g02820 | Os07g0119600 | - | Detail |
| C1H7g03614 | 7:922,344-924,011 | - | C2H7g23659 | CX7g046182 | LOC_Os07g02890 | Os07g0120200 | - | Detail |
| C1H7g18738 | 7:928,003-929,680 | - | C2H7g27541 | CX7g046182 | LOC_Os07g02910 | Os07g0120400 | - | Detail |
| C1H7g23764 | 7:935,485-942,139 | - | C2H7g00378 | CX7g046225 | LOC_Os07g02950 | Os07g0120700 | - | Detail |
| C1H7g15548 | 7:942,252-945,729 | + | C2H7g21223 | CX7g048125 | LOC_Os07g02960 | Os07g0120800 | - | Detail |
| C1H7g12893 | 7:958,808-961,928 | - | C2H7g26170 | CX7g050183 | LOC_Os07g03000 | Os07g0121200 | - | Detail |
| C1H7g14321 | 7:981,901-984,555 | + | C2H7g27931 | CX7g048125 | LOC_Os07g03015 | Os07g0121100 | - | Detail |
| C1H7g07977 | 7:991,904-993,292 | + | C2H7g04174 | CX7g050178 | LOC_Os07g03020 | Os07g0122100 | - | Detail |
| C1H7g14035 | 7:995,844-998,738 | + | C2H7g20863 | CX7g050178 | LOC_Os07g03030 | Os07g0122100 | - | Detail |
| C1H7g23127 | 7:1,001,500-1,004,330 | + | C2H7g20863 | CX7g048125 | LOC_Os07g03030 | Os07g0121800 | - | Detail |
| C1H7g04448 | 7:1,005,300-1,011,357 | + | - | - | - | - | - | Detail |
| C1H7g18741 | 7:1,012,708-1,018,019 | + | C2H7g14673 | CX7g050178 | LOC_Os07g03040 | Os07g0122100 | - | Detail |
| C1H7g27115 | 7:1,019,223-1,022,330 | + | C2H7g17084 | - | - | - | - | Detail |
| C1H7g05081 | 7:1,022,870-1,025,362 | + | C2H7g16176 | CX7g050178 | LOC_Os07g03060 | Os07g0122300 | - | Detail |
| C1H7g16784 | 7:1,028,613-1,034,170 | + | C2H7g25166 | CX7g047470 | LOC_Os07g03070 | Os07g0122400 | - | Detail |
| C1H7g09957 | 7:1,036,943-1,037,447 | + | C2H7g23974 | CX7g047204 | LOC_Os07g03090 | Os07g0122900 | - | Detail |
| C1H7g09673 | 7:1,039,203-1,039,945 | + | C2H7g19474 | CX7g048476 | LOC_Os07g03090 | Os07g0122900 | - | Detail |
| C1H7g03518 | 7:1,045,435-1,047,080 | + | C2H7g17546 | CX7g047204 | LOC_Os07g03100 | Os07g0122900 | - | Detail |
| C1H7g11059 | 7:1,048,733-1,050,535 | - | C2H7g09580 | CX7g047039 | LOC_Os07g03110 | Os07g0123000 | - | Detail |
| C1H7g03699 | 7:1,091,879-1,102,603 | - | C2H7g18401 | CX7g046863 | LOC_Os07g03130 | Os07g0123300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016892 | 12:3,744,642-3,747,496 | - | C1H12g26935 | C2H12g00531 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| CX12g017341 | 12:3,756,279-3,757,543 | - | C1H12g24025 | C2H12g26846 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| CX12g015845 | 12:3,766,908-3,767,057 | + | - | - | - | Os01g0728000 | - | Detail |
| CX12g015947 | 12:3,768,429-3,770,059 | + | C1H12g30820 | C2H12g15436 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g016463 | 12:3,781,263-3,782,871 | - | C1H12g24779 | C2H12g22492 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| CX12g018168 | 12:3,792,466-3,792,624 | - | - | - | - | Os01g0612350 | - | Detail |
| CX12g017419 | 12:3,801,788-3,803,542 | + | C1H12g23758 | C2H12g27718 | LOC_Os12g08140 | Os12g0181900 | - | Detail |
| CX12g017548 | 12:3,810,428-3,814,915 | - | C1H12g10186 | C2H12g19835 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| CX12g017738 | 12:3,817,039-3,820,573 | - | C1H12g04557 | C2H12g22418 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| CX12g017737 | 12:3,827,312-3,827,854 | + | - | - | LOC_Os12g08200 | Os12g0182500 | - | Detail |
| CX12g016669 | 12:3,830,361-3,831,806 | - | C1H12g20756 | C2H12g16765 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| CX12g016799 | 12:3,833,357-3,836,720 | + | C1H12g24787 | C2H12g28848 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| CX12g015810 | 12:3,838,743-3,840,547 | + | C1H12g14015 | C2H12g00347 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| CX12g015556 | 12:3,842,955-3,846,495 | + | C1H12g08117 | C2H12g26410 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| CX12g017411 | 12:3,846,776-3,849,565 | - | C1H12g30783 | C2H12g20510 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| CX12g016591 | 12:3,850,024-3,852,733 | - | C1H12g15428 | C2H12g06987 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| CX12g017966 | 12:3,870,752-3,871,255 | - | C1H12g08161 | C2H9g08238 | - | - | - | Detail |
| CX12g015405 | 12:3,878,630-3,881,461 | + | - | - | LOC_Os12g08670 | Os12g0187500 | - | Detail |
| CX12g017314 | 12:3,890,372-3,894,692 | - | C1H12g25360 | C2H12g09428 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| CX12g016900 | 12:3,913,908-3,915,565 | + | C1H12g07775 | C2H12g03496 | LOC_Os12g08710 | - | - | Detail |