| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05707 | 3:26,222,167-26,226,157 | + | C2H3g17436 | CX3g027914 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| C1H3g00070 | 3:26,276,000-26,281,263 | + | C2H3g05028 | CX3g026782 | LOC_Os03g49350 | Os03g0700400 | LOX-3 | Detail |
| C1H3g28644 | 3:26,295,127-26,301,411 | + | C2H3g00658 | CX3g026204 | LOC_Os03g49380 | Os03g0700700 | - | Detail |
| C1H3g00971 | 3:26,304,817-26,312,495 | + | C2H3g05258 | CX3g025372 | LOC_Os03g49400 | Os03g0700800 | - | Detail |
| C1H3g06905 | 3:26,317,358-26,325,881 | + | C2H3g25047 | CX3g029939 | LOC_Os03g49420 | Os03g0701000 | - | Detail |
| C1H3g16586 | 3:26,327,773-26,330,403 | - | C2H3g16404 | CX3g025036 | LOC_Os03g49430 | Os03g0701100 | - | Detail |
| C1H3g02438 | 3:26,331,306-26,334,484 | + | C2H3g29777 | CX3g031052 | LOC_Os03g49440 | Os03g0701200 | - | Detail |
| C1H3g07329 | 3:26,336,667-26,342,114 | + | C2H3g02417 | CX3g025970 | LOC_Os03g49464 | Os03g0701300 | - | Detail |
| C1H3g30968 | 3:26,344,592-26,345,705 | + | C2H3g02951 | CX3g026197 | - | - | - | Detail |
| C1H3g23591 | 3:26,350,081-26,353,417 | - | C2H3g12750 | CX3g027768 | LOC_Os03g49485 | Os03g0701600 | - | Detail |
| C1H3g03877 | 3:26,362,085-26,366,534 | - | C2H3g06305 | CX3g028834 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| C1H3g05492 | 3:26,372,353-26,378,831 | + | C2H3g14249 | CX3g030270 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| C1H3g29237 | 3:26,378,982-26,383,022 | - | C2H3g17325 | CX3g025317 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| C1H3g26019 | 3:26,392,572-26,394,046 | - | C2H3g13892 | CX3g029512 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| C1H3g02000 | 3:26,398,510-26,399,928 | + | C2H3g03163 | CX3g030273 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| C1H3g01842 | 3:26,419,738-26,424,496 | + | C2H3g18085 | CX3g029283 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| C1H3g13716 | 3:26,429,987-26,430,640 | - | C2H3g29993 | CX3g025714 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| C1H3g15421 | 3:26,430,939-26,435,492 | - | C2H3g11714 | CX3g027255 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| C1H3g29071 | 3:26,437,575-26,442,851 | - | C2H3g22582 | CX3g027190 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| C1H3g29286 | 3:26,443,242-26,448,622 | - | C2H3g04815 | CX3g028984 | LOC_Os03g49620 | Os03g0703200 | TMS10L | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015996 | 12:3,573,447-3,574,889 | + | C1H12g28160 | C2H12g18511 | LOC_Os12g07700 | Os12g0176200 | - | Detail |
| CX12g015938 | 12:3,578,877-3,582,682 | + | C1H12g16798 | C2H12g27983 | LOC_Os12g07720 | Os12g0176500 | OsRFC2 | Detail |
| CX12g018125 | 12:3,585,077-3,590,473 | + | C1H12g30682 | C2H12g27488 | LOC_Os12g07730 | Os12g0176700 | - | Detail |
| CX12g017090 | 12:3,591,280-3,595,585 | - | C1H12g08037 | C2H12g17327 | LOC_Os12g07740 | Os12g0607100 | - | Detail |
| CX12g018216 | 12:3,596,018-3,596,194 | + | - | - | - | - | - | Detail |
| CX12g016901 | 12:3,621,484-3,624,259 | + | C1H12g25677 | C2H12g14704 | LOC_Os12g07780 | Os12g0177500 | - | Detail |
| CX12g016506 | 12:3,630,514-3,633,556 | + | C1H12g07287 | C2H12g12005 | LOC_Os12g07800 | Os12g0177800 | SDRLP-12 | Detail |
| CX12g018084 | 12:3,636,923-3,645,436 | + | C1H12g20497 | C2H12g12449 | LOC_Os12g07810 | Os12g0178000 | - | Detail |
| CX12g015160 | 12:3,646,014-3,649,293 | - | C1H12g08440 | C2H12g21381 | LOC_Os12g07820 | Os12g0178100 | - | Detail |
| CX12g018086 | 12:3,651,311-3,654,563 | - | C1H12g29500 | C2H12g00470 | LOC_Os12g07830 | Os12g0178200 | - | Detail |
| CX12g016891 | 12:3,658,324-3,661,983 | + | C1H12g23790 | C2H12g22484 | LOC_Os12g07840 | Os12g0178300 | - | Detail |
| CX12g018012 | 12:3,666,353-3,666,784 | - | - | - | LOC_Os12g07850 | - | - | Detail |
| CX12g018339 | 12:3,673,691-3,673,867 | - | - | - | - | Os12g0426750 | - | Detail |
| CX12g015086 | 12:3,676,871-3,680,364 | - | C1H12g17071 | C2H12g21098 | LOC_Os12g07874 | Os12g0178633 | - | Detail |
| CX12g017490 | 12:3,680,676-3,688,105 | - | C1H12g18320 | C2H12g02500 | LOC_Os12g07880 | Os12g0178700 | - | Detail |
| CX12g017732 | 12:3,691,153-3,692,220 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07890 | Os12g0529200 | - | Detail |
| CX12g016092 | 12:3,713,716-3,715,125 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07940 | Os12g0179700 | - | Detail |
| CX12g015444 | 12:3,725,846-3,726,139 | + | - | - | - | - | - | Detail |
| CX12g015985 | 12:3,726,197-3,730,582 | - | C1H12g23566 | C2H12g26161 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| CX12g017443 | 12:3,738,400-3,743,307 | + | C1H12g04084 | C2H12g10711 | LOC_Os12g07970 | Os12g0180100 | - | Detail |