| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g07347 | 9:1,075,156-1,085,201 | + | C2H9g26480 | CX9g054967 | LOC_Os09g02650 | Os09g0528000 | - | Detail |
| C1H9g03857 | 9:1,089,890-1,090,900 | - | C2H9g22556 | CX9g056772 | - | Os09g0114700 | - | Detail |
| C1H9g05497 | 9:1,094,971-1,099,710 | - | C2H9g22389 | CX9g054860 | LOC_Os09g02670 | Os09g0114700 | - | Detail |
| C1H9g29836 | 9:1,141,660-1,146,679 | - | C2H9g29266 | CX9g055947 | LOC_Os09g02700 | Os09g0115400 | - | Detail |
| C1H9g07917 | 9:1,149,484-1,153,068 | - | C2H9g16838 | CX9g056825 | LOC_Os09g02710 | Os09g0115500 | - | Detail |
| C1H9g16164 | 9:1,154,820-1,159,543 | - | C2H9g13076 | CX9g055750 | LOC_Os09g02729 | Os09g0115600 | - | Detail |
| C1H9g08981 | 9:1,160,792-1,161,404 | + | C2H9g18574 | - | - | - | - | Detail |
| C1H9g28466 | 9:1,162,521-1,163,458 | + | C2H9g25985 | CX9g054999 | LOC_Os09g02770 | Os09g0115900 | - | Detail |
| C1H9g21332 | 9:1,190,758-1,196,124 | - | C2H9g23279 | CX9g055162 | LOC_Os09g02790 | Os09g0116050 | - | Detail |
| C1H9g29492 | 9:1,211,177-1,223,638 | + | C2H9g04644 | CX9g056724 | LOC_Os09g02810 | Os09g0116400 | - | Detail |
| C1H9g13392 | 9:1,302,265-1,306,703 | - | C2H9g11741 | CX9g057143 | LOC_Os09g03090 | Os09g0119100 | - | Detail |
| C1H9g28426 | 9:1,346,681-1,350,359 | + | C2H9g21669 | CX9g057886 | LOC_Os09g03210 | Os09g0120100 | - | Detail |
| C1H9g22761 | 9:1,373,635-1,398,620 | + | C2H9g18201 | CX9g055691 | LOC_Os09g03370 | Os09g0121000 | OsSMC6 | Detail |
| C1H9g26557 | 9:1,435,834-1,437,305 | + | C2H9g13235 | CX9g057481 | LOC_Os09g03490 | Os09g0121900 | - | Detail |
| C1H9g10296 | 9:1,441,626-1,442,978 | + | C2H9g13516 | CX9g055867 | LOC_Os09g03500 | Os09g0122000 | - | Detail |
| C1H9g03152 | 9:1,485,882-1,488,548 | + | - | CX8g052323 | - | - | - | Detail |
| C1H9g12405 | 9:1,524,317-1,530,319 | + | C2H9g23970 | CX9g057056 | LOC_Os09g03600 | Os09g0123100 | - | Detail |
| C1H9g01360 | 9:1,536,490-1,545,479 | + | C2H9g12853 | CX9g057275 | LOC_Os09g03610 | Os09g0123200 | - | Detail |
| C1H9g19981 | 9:1,549,755-1,556,731 | + | C2H9g03310 | CX9g058087 | LOC_Os09g03620 | Os09g0123300 | - | Detail |
| C1H9g25910 | 9:1,557,502-1,558,296 | - | C2H9g23078 | - | - | Os09g0123400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015996 | 12:3,573,447-3,574,889 | + | C1H12g28160 | C2H12g18511 | LOC_Os12g07700 | Os12g0176200 | - | Detail |
| CX12g015938 | 12:3,578,877-3,582,682 | + | C1H12g16798 | C2H12g27983 | LOC_Os12g07720 | Os12g0176500 | OsRFC2 | Detail |
| CX12g018125 | 12:3,585,077-3,590,473 | + | C1H12g30682 | C2H12g27488 | LOC_Os12g07730 | Os12g0176700 | - | Detail |
| CX12g017090 | 12:3,591,280-3,595,585 | - | C1H12g08037 | C2H12g17327 | LOC_Os12g07740 | Os12g0607100 | - | Detail |
| CX12g018216 | 12:3,596,018-3,596,194 | + | - | - | - | - | - | Detail |
| CX12g016901 | 12:3,621,484-3,624,259 | + | C1H12g25677 | C2H12g14704 | LOC_Os12g07780 | Os12g0177500 | - | Detail |
| CX12g016506 | 12:3,630,514-3,633,556 | + | C1H12g07287 | C2H12g12005 | LOC_Os12g07800 | Os12g0177800 | SDRLP-12 | Detail |
| CX12g018084 | 12:3,636,923-3,645,436 | + | C1H12g20497 | C2H12g12449 | LOC_Os12g07810 | Os12g0178000 | - | Detail |
| CX12g015160 | 12:3,646,014-3,649,293 | - | C1H12g08440 | C2H12g21381 | LOC_Os12g07820 | Os12g0178100 | - | Detail |
| CX12g018086 | 12:3,651,311-3,654,563 | - | C1H12g29500 | C2H12g00470 | LOC_Os12g07830 | Os12g0178200 | - | Detail |
| CX12g016891 | 12:3,658,324-3,661,983 | + | C1H12g23790 | C2H12g22484 | LOC_Os12g07840 | Os12g0178300 | - | Detail |
| CX12g018012 | 12:3,666,353-3,666,784 | - | - | - | LOC_Os12g07850 | - | - | Detail |
| CX12g018339 | 12:3,673,691-3,673,867 | - | - | - | - | Os12g0426750 | - | Detail |
| CX12g015086 | 12:3,676,871-3,680,364 | - | C1H12g17071 | C2H12g21098 | LOC_Os12g07874 | Os12g0178633 | - | Detail |
| CX12g017490 | 12:3,680,676-3,688,105 | - | C1H12g18320 | C2H12g02500 | LOC_Os12g07880 | Os12g0178700 | - | Detail |
| CX12g017732 | 12:3,691,153-3,692,220 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07890 | Os12g0529200 | - | Detail |
| CX12g016092 | 12:3,713,716-3,715,125 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07940 | Os12g0179700 | - | Detail |
| CX12g015444 | 12:3,725,846-3,726,139 | + | - | - | - | - | - | Detail |
| CX12g015985 | 12:3,726,197-3,730,582 | - | C1H12g23566 | C2H12g26161 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| CX12g017443 | 12:3,738,400-3,743,307 | + | C1H12g04084 | C2H12g10711 | LOC_Os12g07970 | Os12g0180100 | - | Detail |