| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07765 | 1:27,213,514-27,217,427 | + | C2H1g28261 | CX1g004752 | LOC_Os01g53000 | Os01g0730300 | - | Detail |
| C1H1g06535 | 1:27,223,577-27,227,045 | - | C2H1g14164 | CX1g000294 | LOC_Os01g53030 | Os01g0730600 | - | Detail |
| C1H1g14431 | 1:27,223,885-27,226,096 | + | C2H1g16061 | CX1g000426 | LOC_Os01g53020 | Os01g0730500 | - | Detail |
| C1H1g09914 | 1:27,235,842-27,236,939 | - | C2H1g00487 | CX1g001404 | LOC_Os01g53040 | Os01g0730700 | OsWRKY14 | Detail |
| C1H1g06745 | 1:27,240,070-27,241,667 | + | C2H1g11513 | CX1g000168 | LOC_Os01g53060 | Os01g0730800 | - | Detail |
| C1H1g24583 | 1:27,242,556-27,248,979 | - | C2H1g14311 | CX1g001666 | LOC_Os01g53070 | Os01g0730900 | - | Detail |
| C1H1g26539 | 1:27,254,399-27,259,561 | - | C2H1g06139 | CX1g001800 | LOC_Os01g53079 | Os01g0731000 | - | Detail |
| C1H1g09554 | 1:27,263,996-27,265,005 | - | C2H1g22498 | - | LOC_Os01g53090 | Os01g0731100 | - | Detail |
| C1H1g05462 | 1:27,271,910-27,272,212 | - | C2H1g25202 | CX1g002698 | LOC_Os01g53130 | Os01g0731800 | - | Detail |
| C1H1g19403 | 1:27,282,303-27,283,163 | + | C2H1g12385 | CX1g005912 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C1H1g13195 | 1:27,282,399-27,282,611 | - | C2H1g12212 | CX1g002007 | - | Os01g0732000 | - | Detail |
| C1H1g18233 | 1:27,286,293-27,290,694 | + | C2H1g09330 | CX1g006701 | LOC_Os01g53150 | Os01g0732200 | - | Detail |
| C1H1g17097 | 1:27,307,974-27,310,990 | + | C2H1g23680 | CX1g000356 | LOC_Os01g53200 | Os01g0732700 | YUCCA3, OsYUCCA3 | Detail |
| C1H1g06233 | 1:27,313,980-27,314,318 | - | C2H1g25806 | CX1g002859 | - | - | - | Detail |
| C1H1g02415 | 1:27,320,819-27,321,669 | + | C2H1g04447 | CX1g003483 | LOC_Os01g53220 | Os01g0733200 | OsHsfC1b | Detail |
| C1H1g21238 | 1:27,329,326-27,329,709 | - | C2H1g19099 | CX1g006706 | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| C1H1g25026 | 1:27,334,135-27,336,442 | + | C2H1g23186 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C1H1g17481 | 1:27,337,443-27,342,915 | - | C2H1g16933 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C1H1g18098 | 1:27,349,679-27,353,051 | + | C2H1g28398 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C1H1g05786 | 1:27,356,992-27,357,542 | + | C2H1g03923 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015996 | 12:3,573,447-3,574,889 | + | C1H12g28160 | C2H12g18511 | LOC_Os12g07700 | Os12g0176200 | - | Detail |
| CX12g015938 | 12:3,578,877-3,582,682 | + | C1H12g16798 | C2H12g27983 | LOC_Os12g07720 | Os12g0176500 | OsRFC2 | Detail |
| CX12g018125 | 12:3,585,077-3,590,473 | + | C1H12g30682 | C2H12g27488 | LOC_Os12g07730 | Os12g0176700 | - | Detail |
| CX12g017090 | 12:3,591,280-3,595,585 | - | C1H12g08037 | C2H12g17327 | LOC_Os12g07740 | Os12g0607100 | - | Detail |
| CX12g018216 | 12:3,596,018-3,596,194 | + | - | - | - | - | - | Detail |
| CX12g016901 | 12:3,621,484-3,624,259 | + | C1H12g25677 | C2H12g14704 | LOC_Os12g07780 | Os12g0177500 | - | Detail |
| CX12g016506 | 12:3,630,514-3,633,556 | + | C1H12g07287 | C2H12g12005 | LOC_Os12g07800 | Os12g0177800 | SDRLP-12 | Detail |
| CX12g018084 | 12:3,636,923-3,645,436 | + | C1H12g20497 | C2H12g12449 | LOC_Os12g07810 | Os12g0178000 | - | Detail |
| CX12g015160 | 12:3,646,014-3,649,293 | - | C1H12g08440 | C2H12g21381 | LOC_Os12g07820 | Os12g0178100 | - | Detail |
| CX12g018086 | 12:3,651,311-3,654,563 | - | C1H12g29500 | C2H12g00470 | LOC_Os12g07830 | Os12g0178200 | - | Detail |
| CX12g016891 | 12:3,658,324-3,661,983 | + | C1H12g23790 | C2H12g22484 | LOC_Os12g07840 | Os12g0178300 | - | Detail |
| CX12g018012 | 12:3,666,353-3,666,784 | - | - | - | LOC_Os12g07850 | - | - | Detail |
| CX12g018339 | 12:3,673,691-3,673,867 | - | - | - | - | Os12g0426750 | - | Detail |
| CX12g015086 | 12:3,676,871-3,680,364 | - | C1H12g17071 | C2H12g21098 | LOC_Os12g07874 | Os12g0178633 | - | Detail |
| CX12g017490 | 12:3,680,676-3,688,105 | - | C1H12g18320 | C2H12g02500 | LOC_Os12g07880 | Os12g0178700 | - | Detail |
| CX12g017732 | 12:3,691,153-3,692,220 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07890 | Os12g0529200 | - | Detail |
| CX12g016092 | 12:3,713,716-3,715,125 | + | C1H12g07184 | C2H12g00295 | LOC_Os12g07940 | Os12g0179700 | - | Detail |
| CX12g015444 | 12:3,725,846-3,726,139 | + | - | - | - | - | - | Detail |
| CX12g015985 | 12:3,726,197-3,730,582 | - | C1H12g23566 | C2H12g26161 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| CX12g017443 | 12:3,738,400-3,743,307 | + | C1H12g04084 | C2H12g10711 | LOC_Os12g07970 | Os12g0180100 | - | Detail |