| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16650 | 3:31,462,462-31,467,174 | + | C1H3g00836 | CX3g029390 | LOC_Os03g60710 | Os03g0821900 | - | Detail |
| C2H3g05197 | 3:31,468,597-31,469,205 | - | C1H3g22161 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C2H3g28970 | 3:31,470,319-31,470,807 | - | C1H3g30466 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C2H3g26732 | 3:31,487,173-31,488,805 | - | C1H3g30684 | CX3g029250 | LOC_Os03g60740 | Os03g0822200 | - | Detail |
| C2H3g00930 | 3:31,489,652-31,491,555 | + | C1H3g07533 | CX3g030322 | LOC_Os03g60750 | Os03g0822300 | - | Detail |
| C2H3g29253 | 3:31,497,433-31,500,472 | + | C1H3g08406 | CX3g026461 | LOC_Os03g60780 | Os03g0822700 | - | Detail |
| C2H3g29318 | 3:31,500,742-31,502,311 | + | C1H3g13457 | CX3g026368 | LOC_Os03g60790 | Os03g0822800 | - | Detail |
| C2H3g15491 | 3:31,502,862-31,506,876 | + | C1H3g01506 | CX3g025072 | LOC_Os03g60800 | Os03g0822900 | - | Detail |
| C2H3g22473 | 3:31,514,830-31,519,572 | - | C1H3g06740 | CX3g027087 | LOC_Os03g60820 | Os03g0823100 | OsXTPH1 | Detail |
| C2H3g15918 | 3:31,523,675-31,524,169 | - | C1H3g24263 | CX3g030305 | LOC_Os03g60840 | Os03g0823400 | - | Detail |
| C2H3g26506 | 3:31,532,309-31,534,951 | - | C1H3g29645 | CX3g026712 | LOC_Os03g60850 | Os03g0823500 | - | Detail |
| C2H3g00093 | 3:31,555,109-31,557,705 | - | C1H3g11164 | CX3g026664 | LOC_Os03g60870 | Os03g0823700 | - | Detail |
| C2H3g02263 | 3:31,559,835-31,563,536 | - | C1H3g23866 | CX3g027221 | LOC_Os03g60880 | Os03g0823800 | - | Detail |
| C2H3g21507 | 3:31,565,794-31,567,761 | - | C1H3g01074 | CX3g030885 | LOC_Os03g60890 | Os03g0436300 | - | Detail |
| C2H3g11643 | 3:31,571,751-31,576,157 | - | C1H3g20395 | CX3g028969 | LOC_Os03g60910 | Os03g0824100 | OspTAC2 | Detail |
| C2H3g24839 | 3:31,576,475-31,578,305 | + | C1H3g15763 | CX3g029964 | LOC_Os03g60920 | Os03g0824200 | - | Detail |
| C2H3g29813 | 3:31,579,358-31,587,038 | + | C1H3g22993 | CX3g026240 | LOC_Os03g60930 | Os03g0824300 | - | Detail |
| C2H3g08790 | 3:31,587,275-31,589,732 | + | C1H3g30240 | CX3g029491 | LOC_Os03g60939 | Os03g0824400 | - | Detail |
| C2H3g23783 | 3:31,590,359-31,591,694 | - | C1H3g23681 | - | LOC_Os03g60950 | Os03g0824500 | - | Detail |
| C2H3g29419 | 3:31,593,720-31,595,221 | + | C1H3g14797 | CX3g026521 | LOC_Os03g60960 | Os03g0824600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015568 | 12:3,079,879-3,085,570 | + | C1H12g14530 | C2H12g19247 | LOC_Os12g06870 | Os12g0165900 | - | Detail |
| CX12g018721 | 12:3,088,138-3,093,946 | + | C1H12g31175 | C2H12g19586 | LOC_Os12g06890 | Os12g0166000 | - | Detail |
| CX12g016377 | 12:3,097,977-3,099,559 | - | C1H12g26980 | C2H12g06847 | LOC_Os12g06900 | Os12g0166300 | - | Detail |
| CX12g018245 | 12:3,101,397-3,109,379 | + | C1H12g11054 | C2H12g19939 | LOC_Os12g06910 | Os12g0166500 | - | Detail |
| CX12g017000 | 12:3,117,323-3,122,413 | + | C1H12g20663 | C2H12g08053 | LOC_Os12g06920 | Os12g0166600 | - | Detail |
| CX12g016890 | 12:3,139,205-3,140,241 | + | - | - | LOC_Os12g06960 | - | - | Detail |
| CX12g017588 | 12:3,141,534-3,142,715 | + | C1H12g09231 | - | LOC_Os12g06960 | Os12g0129700 | - | Detail |
| CX12g015254 | 12:3,144,447-3,144,863 | - | C1H11g06945 | - | LOC_Os12g06970 | Os12g0167601 | FEB3 | Detail |
| CX12g015798 | 12:3,146,273-3,156,878 | - | C1H12g08458 | C2H12g00878 | LOC_Os12g06980 | Os12g0167700 | - | Detail |
| CX12g016336 | 12:3,160,648-3,161,058 | - | C1H12g07608 | C2H12g30034 | LOC_Os12g06990 | - | - | Detail |
| CX12g015790 | 12:3,164,449-3,167,565 | + | C1H12g17545 | C2H12g04399 | LOC_Os12g07010 | Os12g0167900 | RPL3A, OsRPL3A, ARP1, ARP3 | Detail |
| CX12g015615 | 12:3,167,975-3,171,310 | + | C1H12g31026 | C2H12g19833 | LOC_Os12g07020 | Os12g0168000 | - | Detail |
| CX12g016389 | 12:3,173,805-3,175,983 | - | C1H12g19083 | C2H12g28631 | LOC_Os12g07030 | Os12g0168100 | - | Detail |
| CX12g018215 | 12:3,184,958-3,185,137 | + | - | - | - | - | - | Detail |
| CX12g015166 | 12:3,186,190-3,189,599 | - | C1H12g04819 | C2H12g05405 | LOC_Os12g07050 | Os12g0168200 | - | Detail |
| CX12g018681 | 12:3,192,754-3,197,891 | + | C1H12g19579 | C2H12g18194 | LOC_Os12g07060 | Os12g0168400 | - | Detail |
| CX12g016053 | 12:3,202,919-3,206,866 | + | C1H12g19512 | C2H12g08447 | LOC_Os12g07110 | Os12g0168700 | - | Detail |
| CX12g015225 | 12:3,214,320-3,215,693 | + | C1H12g04767 | C2H12g15604 | LOC_Os12g07120 | Os12g0168800 | - | Detail |
| CX12g017113 | 12:3,218,027-3,220,503 | - | C1H12g27317 | C2H12g24626 | LOC_Os12g07140 | Os12g0168900 | - | Detail |
| CX12g015164 | 12:3,221,683-3,227,478 | - | C1H12g19831 | C2H12g20146 | LOC_Os12g07150 | Os12g0169000 | - | Detail |