| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01326 | 1:30,278,642-30,283,698 | + | C2H1g24587 | CX1g000361 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| C1H1g24285 | 1:30,284,058-30,284,504 | - | C2H5g09380 | CX1g004944 | LOC_Os01g58800 | Os01g0802200 | - | Detail |
| C1H1g07782 | 1:30,290,357-30,291,268 | + | C2H5g19411 | CX1g004781 | LOC_Os01g58850 | Os01g0802600 | - | Detail |
| C1H1g15075 | 1:30,297,546-30,299,729 | - | C2H1g08686 | CX1g002565 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| C1H1g08773 | 1:30,305,163-30,306,251 | - | C2H1g10922 | CX1g003630 | LOC_Os01g58870 | Os01g0802850 | - | Detail |
| C1H1g24422 | 1:30,320,510-30,321,291 | + | C2H1g30330 | CX1g002172 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| C1H1g07293 | 1:30,332,316-30,334,119 | - | C2H1g25597 | CX1g000223 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| C1H1g24602 | 1:30,349,786-30,351,309 | + | C2H1g05023 | CX1g002651 | LOC_Os01g58960 | Os01g0803800 | CYP94D12, OsCYP94D12 | Detail |
| C1H1g19345 | 1:30,352,665-30,354,203 | + | C2H1g26033 | CX1g005013 | LOC_Os01g58970 | Os01g0803900 | CYP94D11, OsCYP94D11, OsCYPq1 | Detail |
| C1H1g07529 | 1:30,369,415-30,370,950 | + | C2H1g05023 | CX1g005013 | LOC_Os01g59020 | Os01g0804400 | CYP94D7, OsCYP94D7 | Detail |
| C1H1g00313 | 1:30,374,422-30,375,975 | + | C2H1g05023 | CX1g005013 | LOC_Os01g59050 | Os01g0804900 | CYP94D6, OsCYP94D6 | Detail |
| C1H1g26715 | 1:30,377,934-30,378,206 | - | C2H1g28126 | CX1g005195 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| C1H1g18258 | 1:30,378,461-30,379,822 | + | - | CX1g004717 | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| C1H1g02848 | 1:30,380,989-30,382,207 | - | C2H1g18483 | CX1g000028 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| C1H1g13654 | 1:30,382,319-30,388,020 | + | C2H1g25136 | CX1g000520 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| C1H1g23718 | 1:30,390,452-30,392,930 | + | C2H1g05127 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C1H1g31482 | 1:30,393,285-30,396,383 | - | C2H1g05794 | CX1g004982 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| C1H1g30942 | 1:30,397,326-30,403,604 | - | C2H1g03484 | CX1g001600 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| C1H1g01953 | 1:30,405,204-30,408,876 | - | C2H1g17768 | CX1g000155 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| C1H1g21118 | 1:30,410,297-30,413,952 | + | C2H1g29760 | CX1g003536 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015432 | 12:2,937,490-2,941,178 | + | C1H12g07616 | C2H12g02926 | LOC_Os12g06520 | Os12g0162500 | - | Detail |
| CX12g017023 | 12:2,946,686-2,948,353 | + | C1H12g14855 | C2H12g04137 | LOC_Os12g06540 | Os12g0162700 | - | Detail |
| CX12g017450 | 12:2,958,748-2,965,868 | + | C1H12g07730 | C2H12g07375 | LOC_Os12g06670 | Os12g0163800 | - | Detail |
| CX12g015091 | 12:2,968,233-2,970,864 | + | C1H12g11936 | C2H12g06388 | LOC_Os12g06660 | Os12g0163700 | - | Detail |
| CX12g015942 | 12:2,974,439-2,975,614 | + | C1H12g21815 | C2H12g14509 | LOC_Os12g06650 | Os12g0163600 | OsPGL1 | Detail |
| CX12g016701 | 12:2,978,065-2,979,045 | + | - | - | LOC_Os12g06640 | Os12g0163500 | - | Detail |
| CX12g017371 | 12:2,982,545-2,986,293 | + | C1H12g10951 | C2H12g05777 | LOC_Os12g06630 | Os12g0163400 | - | Detail |
| CX12g018416 | 12:2,988,664-2,990,421 | + | C1H12g15474 | C2H12g23191 | LOC_Os12g06620 | Os12g0163300 | - | Detail |
| CX12g017876 | 12:2,992,173-2,997,706 | - | C1H12g05227 | C2H12g28717 | LOC_Os12g06610 | Os12g0163200 | - | Detail |
| CX12g017374 | 12:3,000,308-3,003,881 | + | C1H12g11426 | C2H12g09245 | LOC_Os12g06570 | Os12g0163000 | OsCNGC8 | Detail |
| CX12g018286 | 12:3,005,857-3,010,409 | + | C1H12g23930 | C2H12g09409 | LOC_Os12g06560 | Os12g0162900 | - | Detail |
| CX12g017266 | 12:3,013,350-3,013,613 | - | - | - | - | - | - | Detail |
| CX12g016414 | 12:3,032,573-3,033,730 | + | C1H11g03095 | - | LOC_Os12g06780 | Os12g0164600 | - | Detail |
| CX12g018760 | 12:3,036,174-3,041,596 | - | C1H12g04385 | C2H12g05337 | LOC_Os12g06800 | Os12g0164800 | - | Detail |
| CX12g015319 | 12:3,044,997-3,055,176 | - | - | - | LOC_Os12g06810 | Os12g0165000 | - | Detail |
| CX12g016446 | 12:3,059,596-3,061,135 | - | C1H12g15193 | C2H12g04241 | LOC_Os12g06820 | Os12g0165200 | - | Detail |
| CX12g017703 | 12:3,062,199-3,063,164 | + | C1H12g06624 | C2H12g06250 | LOC_Os12g06830 | Os12g0170800 | - | Detail |
| CX12g015835 | 12:3,063,646-3,065,745 | - | C1H12g29219 | C2H12g08720 | LOC_Os12g06840 | Os12g0165600 | - | Detail |
| CX12g018138 | 12:3,066,167-3,066,319 | - | - | - | - | - | - | Detail |
| CX12g016648 | 12:3,067,721-3,070,347 | - | C1H12g12668 | C2H12g28260 | LOC_Os12g06850 | Os12g0165700 | - | Detail |