| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06828 | 3:2,212,313-2,215,256 | + | C1H3g08260 | CX3g030037 | LOC_Os03g05270 | Os03g0145900 | - | Detail |
| C2H3g21623 | 3:2,216,705-2,217,630 | - | C1H3g20268 | CX3g028017 | - | - | - | Detail |
| C2H3g05886 | 3:2,217,855-2,222,882 | + | C1H3g29909 | CX3g029228 | LOC_Os03g05280 | Os03g0146000 | - | Detail |
| C2H3g28085 | 3:2,226,825-2,228,647 | - | C1H3g25012 | CX3g029808 | LOC_Os03g05290 | Os03g0146100 | - | Detail |
| C2H3g09242 | 3:2,234,286-2,234,757 | + | C1H3g19868 | CX3g025472 | LOC_Os03g05300 | Os03g0146300 | - | Detail |
| C2H3g13895 | 3:2,238,644-2,242,941 | + | C1H3g27335 | CX3g025739 | LOC_Os03g05310 | Os03g0146400 | - | Detail |
| C2H3g14044 | 3:2,245,615-2,245,935 | + | C1H3g02545 | CX3g026084 | - | - | - | Detail |
| C2H3g11885 | 3:2,245,944-2,248,740 | + | C1H3g29062 | CX3g026084 | LOC_Os03g05320 | Os03g0146500 | - | Detail |
| C2H3g15286 | 3:2,248,961-2,270,805 | + | C1H3g17015 | CX3g025922 | LOC_Os03g05330 | Os03g0146600 | - | Detail |
| C2H3g18202 | 3:2,288,713-2,299,155 | - | C1H3g30836 | CX3g029888 | LOC_Os03g05390 | Os03g0147400 | - | Detail |
| C2H3g23117 | 3:2,308,929-2,313,905 | - | C1H3g06760 | CX3g025434 | LOC_Os03g05420 | Os03g0147700 | - | Detail |
| C2H3g11846 | 3:2,314,623-2,316,895 | + | C1H3g11420 | CX3g028095 | LOC_Os03g05430 | Os03g0147900 | - | Detail |
| C2H3g18230 | 3:2,317,489-2,318,731 | - | C1H3g01679 | CX3g027224 | LOC_Os03g05440 | Os03g0148000 | - | Detail |
| C2H3g10578 | 3:2,323,802-2,324,729 | - | C1H3g05732 | CX3g025933 | LOC_Os03g05450 | Os03g0148300 | - | Detail |
| C2H3g08315 | 3:2,327,349-2,328,680 | - | C1H3g20087 | CX3g026676 | LOC_Os03g05460 | Os03g0148400 | - | Detail |
| C2H3g07329 | 3:2,334,599-2,338,463 | + | C1H3g24625 | CX3g026748 | LOC_Os03g05470 | Os03g0148700 | - | Detail |
| C2H3g09418 | 3:2,341,352-2,344,058 | - | C1H3g03956 | CX3g025264 | LOC_Os03g05480 | Os03g0148800 | - | Detail |
| C2H3g30161 | 3:2,358,159-2,358,798 | + | C1H3g20130 | CX3g031194 | LOC_Os03g05500 | Os03g0149000 | - | Detail |
| C2H3g15126 | 3:2,361,784-2,363,363 | - | C1H3g20743 | CX3g024956 | LOC_Os03g05510 | Os03g0149100 | CRL1, crl1, crl1*, ARL1, ARL1/CRL1 | Detail |
| C2H3g27191 | 3:2,374,900-2,378,018 | - | C1H3g13230 | CX3g027575 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015199 | 12:2,511,633-2,516,200 | - | C1H12g14419 | C2H12g28920 | LOC_Os12g05900 | Os12g0155200 | - | Detail |
| CX12g016405 | 12:2,528,442-2,532,559 | + | C1H12g09556 | C2H12g08033 | LOC_Os12g05920 | Os12g0155300 | - | Detail |
| CX12g017094 | 12:2,540,214-2,542,748 | - | C1H12g03623 | C2H12g20876 | LOC_Os12g05930 | Os12g0155400 | - | Detail |
| CX12g015061 | 12:2,547,365-2,548,477 | + | C1H12g05918 | C2H12g06972 | LOC_Os12g05940 | Os12g0225300 | - | Detail |
| CX12g015310 | 12:2,577,001-2,577,930 | + | C1H12g25659 | C2H12g09367 | LOC_Os12g05990 | Os12g0156100 | - | Detail |
| CX12g018344 | 12:2,580,504-2,581,585 | + | C1H12g22379 | C2H12g21191 | LOC_Os12g06010 | - | - | Detail |
| CX12g018607 | 12:2,587,966-2,591,010 | + | C1H12g25878 | C2H12g11114 | LOC_Os12g06020 | Os12g0156400 | OsDCP1 | Detail |
| CX12g016643 | 12:2,592,825-2,596,526 | - | C1H12g25918 | C2H12g15516 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| CX12g016293 | 12:2,608,410-2,608,961 | - | C1H12g00007 | C2H12g03157 | LOC_Os12g06050 | Os12g0106600 | - | Detail |
| CX12g015094 | 12:2,611,149-2,611,298 | + | - | - | - | - | - | Detail |
| CX12g017632 | 12:2,619,278-2,626,017 | + | C1H12g29220 | C2H12g03761 | LOC_Os12g06060 | Os12g0156866 | - | Detail |
| CX12g017739 | 12:2,633,747-2,634,867 | + | C1H12g23544 | C2H12g18883 | LOC_Os12g06070 | Os12g0156900 | - | Detail |
| CX12g015097 | 12:2,652,555-2,656,538 | - | C1H12g29304 | C2H12g07567 | LOC_Os12g06100 | Os12g0157200 | - | Detail |
| CX12g016380 | 12:2,671,602-2,671,868 | - | - | - | - | - | - | Detail |
| CX12g017990 | 12:2,674,188-2,674,556 | + | C1H12g00096 | C2H12g21615 | LOC_Os12g06130 | Os12g0157700 | - | Detail |
| CX12g016114 | 12:2,711,255-2,711,863 | - | - | - | LOC_Os12g06160 | Os12g0158400 | - | Detail |
| CX12g016557 | 12:2,715,301-2,715,468 | + | - | - | - | - | - | Detail |
| CX12g017249 | 12:2,718,026-2,718,292 | - | - | C2H2g15600 | LOC_Os11g04790 | Os01g0743732 | - | Detail |
| CX12g016240 | 12:2,735,750-2,741,750 | + | C1H12g07813 | C2H12g13101 | LOC_Os12g06180 | Os12g0158600 | - | Detail |
| CX12g015115 | 12:2,742,401-2,742,901 | - | - | - | LOC_Os12g06190 | Os12g0158700 | - | Detail |