| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00412 | 1:1,205,291-1,207,738 | + | C2H1g24576 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C1H1g25838 | 1:1,209,203-1,209,889 | + | C2H1g17865 | CX1g002042 | LOC_Os01g03720 | Os01g0127450 | - | Detail |
| C1H1g17663 | 1:1,210,419-1,211,515 | + | C2H1g02319 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C1H1g24827 | 1:1,215,246-1,217,557 | + | C2H1g03781 | CX1g006285 | LOC_Os01g02760 | Os01g0127700 | - | Detail |
| C1H1g05668 | 1:1,217,661-1,218,315 | + | C2H1g03781 | CX1g006285 | LOC_Os01g03690 | Os01g0117400 | - | Detail |
| C1H1g08835 | 1:1,225,922-1,230,986 | + | C2H1g13836 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C1H1g25654 | 1:1,241,292-1,242,522 | - | C2H1g25959 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C1H1g31764 | 1:1,254,615-1,256,427 | - | C2H1g01385 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C1H1g04042 | 1:1,257,095-1,260,002 | + | C2H1g18960 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C1H1g30874 | 1:1,260,240-1,261,552 | - | C2H1g15883 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C1H1g07436 | 1:1,262,139-1,267,477 | - | C2H1g19347 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C1H1g20521 | 1:1,272,265-1,280,309 | + | C2H1g18545 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C1H1g27481 | 1:1,292,873-1,294,279 | + | C2H1g10390 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C1H1g30507 | 1:1,306,551-1,309,571 | - | C2H1g17049 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C1H1g11492 | 1:1,322,229-1,323,238 | + | C2H1g13371 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C1H1g30416 | 1:1,349,867-1,352,853 | - | C2H1g29639 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C1H1g04895 | 1:1,357,467-1,357,897 | - | C2H1g15465 | - | LOC_Os01g03914 | - | - | Detail |
| C1H1g15284 | 1:1,383,194-1,387,792 | + | C2H1g02978 | CX1g003798 | LOC_Os01g03950 | Os01g0130400 | - | Detail |
| C1H1g17044 | 1:1,417,733-1,418,275 | + | C2H1g14763 | - | - | - | - | Detail |
| C1H1g07180 | 1:1,419,589-1,420,156 | + | C2H1g14763 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015199 | 12:2,511,633-2,516,200 | - | C1H12g14419 | C2H12g28920 | LOC_Os12g05900 | Os12g0155200 | - | Detail |
| CX12g016405 | 12:2,528,442-2,532,559 | + | C1H12g09556 | C2H12g08033 | LOC_Os12g05920 | Os12g0155300 | - | Detail |
| CX12g017094 | 12:2,540,214-2,542,748 | - | C1H12g03623 | C2H12g20876 | LOC_Os12g05930 | Os12g0155400 | - | Detail |
| CX12g015061 | 12:2,547,365-2,548,477 | + | C1H12g05918 | C2H12g06972 | LOC_Os12g05940 | Os12g0225300 | - | Detail |
| CX12g015310 | 12:2,577,001-2,577,930 | + | C1H12g25659 | C2H12g09367 | LOC_Os12g05990 | Os12g0156100 | - | Detail |
| CX12g018344 | 12:2,580,504-2,581,585 | + | C1H12g22379 | C2H12g21191 | LOC_Os12g06010 | - | - | Detail |
| CX12g018607 | 12:2,587,966-2,591,010 | + | C1H12g25878 | C2H12g11114 | LOC_Os12g06020 | Os12g0156400 | OsDCP1 | Detail |
| CX12g016643 | 12:2,592,825-2,596,526 | - | C1H12g25918 | C2H12g15516 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| CX12g016293 | 12:2,608,410-2,608,961 | - | C1H12g00007 | C2H12g03157 | LOC_Os12g06050 | Os12g0106600 | - | Detail |
| CX12g015094 | 12:2,611,149-2,611,298 | + | - | - | - | - | - | Detail |
| CX12g017632 | 12:2,619,278-2,626,017 | + | C1H12g29220 | C2H12g03761 | LOC_Os12g06060 | Os12g0156866 | - | Detail |
| CX12g017739 | 12:2,633,747-2,634,867 | + | C1H12g23544 | C2H12g18883 | LOC_Os12g06070 | Os12g0156900 | - | Detail |
| CX12g015097 | 12:2,652,555-2,656,538 | - | C1H12g29304 | C2H12g07567 | LOC_Os12g06100 | Os12g0157200 | - | Detail |
| CX12g016380 | 12:2,671,602-2,671,868 | - | - | - | - | - | - | Detail |
| CX12g017990 | 12:2,674,188-2,674,556 | + | C1H12g00096 | C2H12g21615 | LOC_Os12g06130 | Os12g0157700 | - | Detail |
| CX12g016114 | 12:2,711,255-2,711,863 | - | - | - | LOC_Os12g06160 | Os12g0158400 | - | Detail |
| CX12g016557 | 12:2,715,301-2,715,468 | + | - | - | - | - | - | Detail |
| CX12g017249 | 12:2,718,026-2,718,292 | - | - | C2H2g15600 | LOC_Os11g04790 | Os01g0743732 | - | Detail |
| CX12g016240 | 12:2,735,750-2,741,750 | + | C1H12g07813 | C2H12g13101 | LOC_Os12g06180 | Os12g0158600 | - | Detail |
| CX12g015115 | 12:2,742,401-2,742,901 | - | - | - | LOC_Os12g06190 | Os12g0158700 | - | Detail |