| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24954 | 3:12,463,962-12,467,261 | + | C1H3g19204 | CX3g029989 | LOC_Os03g24730 | Os03g0362200 | - | Detail |
| C2H3g21455 | 3:12,474,431-12,477,062 | + | C1H3g31305 | CX3g027415 | LOC_Os03g24820 | Os03g0363100 | - | Detail |
| C2H3g21145 | 3:12,478,480-12,480,811 | + | C1H3g22124 | CX3g028253 | LOC_Os03g24830 | Os03g0363200 | - | Detail |
| C2H3g24910 | 3:12,484,109-12,485,941 | + | C1H3g12375 | CX3g025171 | LOC_Os03g24844 | Os03g0363400 | - | Detail |
| C2H3g07234 | 3:12,486,790-12,491,902 | - | C1H3g31412 | CX3g026007 | LOC_Os03g24860 | Os03g0363500 | - | Detail |
| C2H3g23765 | 3:12,493,279-12,498,033 | - | C1H3g09669 | CX3g026520 | LOC_Os03g24870 | Os03g0363600 | OsERD2 | Detail |
| C2H3g07525 | 3:12,499,946-12,503,343 | - | C1H3g25341 | CX3g026469 | LOC_Os03g24880 | Os03g0363700 | - | Detail |
| C2H3g30503 | 3:12,503,622-12,507,768 | + | C1H3g24559 | CX3g025654 | LOC_Os03g24890 | Os03g0363800 | OsSCL28 | Detail |
| C2H3g27719 | 3:12,511,027-12,515,472 | + | C1H3g28751 | CX3g026595 | LOC_Os03g24900 | Os03g0363900 | DHHC09, DHHC09-II | Detail |
| C2H3g02370 | 3:12,516,096-12,518,735 | - | C1H3g13730 | CX3g027300 | LOC_Os03g24910 | Os03g0363950 | - | Detail |
| C2H3g17587 | 3:12,524,315-12,526,950 | - | C1H3g05488 | CX3g025659 | LOC_Os03g24920 | Os03g0364000 | - | Detail |
| C2H3g05857 | 3:12,533,660-12,535,295 | + | C1H3g09584 | CX3g031356 | LOC_Os03g24930 | Os03g0364400 | - | Detail |
| C2H3g14199 | 3:12,540,077-12,547,571 | - | C1H3g19834 | CX3g025767 | LOC_Os03g24940 | Os03g0364500 | - | Detail |
| C2H3g02255 | 3:12,571,730-12,574,717 | + | C1H3g08779 | CX3g028963 | LOC_Os03g24950 | Os03g0364700 | - | Detail |
| C2H3g14794 | 3:12,585,885-12,586,145 | + | C1H3g20332 | CX3g025793 | LOC_Os03g24960 | Os03g0365000 | - | Detail |
| C2H3g19293 | 3:12,592,693-12,595,828 | + | C1H3g24694 | CX3g025793 | LOC_Os03g25000 | Os03g0365000 | - | Detail |
| C2H3g11722 | 3:12,611,705-12,614,922 | + | C1H3g24694 | CX3g025793 | LOC_Os03g25030 | Os03g0365800 | HTA1 | Detail |
| C2H3g14009 | 3:12,616,174-12,619,558 | + | C1H3g02602 | CX3g030240 | LOC_Os03g25040 | Os03g0365900 | - | Detail |
| C2H3g02613 | 3:12,620,568-12,623,197 | - | C1H3g23692 | CX3g028892 | LOC_Os03g25050 | Os03g0366000 | - | Detail |
| C2H3g02942 | 3:12,643,981-12,651,288 | + | C1H3g05133 | CX3g026420 | LOC_Os03g25070 | Os03g0366200 | OsCBK | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015472 | 12:2,403,185-2,403,646 | - | C1H5g12553 | C2H5g24320 | - | - | - | Detail |
| CX12g017584 | 12:2,410,676-2,411,545 | + | C1H12g29017 | C2H12g22774 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| CX12g016609 | 12:2,412,529-2,419,279 | - | C1H12g28763 | C2H12g08928 | LOC_Os12g05680 | Os12g0152900 | OsbZIP83, TGAL11 | Detail |
| CX12g017987 | 12:2,427,706-2,428,095 | - | - | - | LOC_Os12g05690 | Os12g0153200 | - | Detail |
| CX12g015412 | 12:2,430,958-2,431,338 | - | - | - | LOC_Os12g05690 | Os12g0153200 | - | Detail |
| CX12g016849 | 12:2,439,280-2,441,342 | + | - | C2H12g03575 | LOC_Os12g05709 | Os12g0153400 | - | Detail |
| CX12g017499 | 12:2,442,972-2,443,229 | - | - | - | - | Os12g0584700 | - | Detail |
| CX12g018750 | 12:2,449,992-2,450,639 | + | - | - | LOC_Os12g05720 | - | - | Detail |
| CX12g016099 | 12:2,453,883-2,454,805 | + | C1H12g29526 | C2H12g05776 | LOC_Os12g05730 | Os12g0153500 | - | Detail |
| CX12g015296 | 12:2,457,742-2,460,106 | + | C1H12g08598 | C2H12g00041 | LOC_Os12g05740 | Os12g0153600 | - | Detail |
| CX12g017005 | 12:2,460,395-2,461,513 | - | C1H12g25677 | C2H12g14704 | LOC_Os12g05750 | Os12g0153700 | - | Detail |
| CX12g017427 | 12:2,462,982-2,464,280 | + | C1H12g26088 | C2H12g01967 | LOC_Os12g05760 | Os12g0244100 | - | Detail |
| CX12g017117 | 12:2,469,971-2,470,723 | + | - | - | LOC_Os12g05770 | Os12g0153900 | - | Detail |
| CX12g017479 | 12:2,474,758-2,477,538 | - | C1H12g02157 | C2H12g09749 | LOC_Os12g05780 | Os12g0154600 | - | Detail |
| CX12g017672 | 12:2,481,521-2,484,201 | + | C1H12g30827 | C2H12g04677 | LOC_Os12g05810 | Os12g0154400 | - | Detail |
| CX12g018561 | 12:2,486,432-2,488,980 | + | C1H12g29174 | C2H12g18141 | LOC_Os12g05830 | Os12g0154600 | - | Detail |
| CX12g018459 | 12:2,490,475-2,491,283 | - | C1H12g23452 | C2H12g12501 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| CX12g017127 | 12:2,494,144-2,494,953 | - | C1H12g24006 | C2H12g27455 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| CX12g015507 | 12:2,497,895-2,498,702 | - | C1H12g18669 | C2H12g23733 | LOC_Os12g05870 | Os12g0154900 | GLP12-3, GLP12-1, OsGLP12-3 | Detail |
| CX12g017636 | 12:2,508,520-2,509,404 | + | - | - | - | - | - | Detail |