| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23040 | 6:19,462,349-19,466,708 | + | C1H6g13252 | CX6g043308 | LOC_Os06g37430 | Os06g0571300 | - | Detail |
| C2H6g16813 | 6:19,468,337-19,471,979 | - | C1H6g22488 | CX6g042768 | LOC_Os06g37440 | Os06g0571400 | - | Detail |
| C2H6g11123 | 6:19,488,117-19,489,515 | + | C1H6g11157 | CX6g044613 | LOC_Os06g37450 | Os06g0571800 | OsGATA16 | Detail |
| C2H6g01286 | 6:19,505,222-19,507,846 | - | C1H6g23835 | CX6g044344 | LOC_Os06g37500 | Os06g0572300 | OsCKX10 | Detail |
| C2H6g12789 | 6:19,510,605-19,512,936 | - | C1H6g22289 | CX6g043094 | LOC_Os06g37510 | Os06g0572400 | OsTET9 | Detail |
| C2H6g26877 | 6:19,557,925-19,563,905 | + | C1H6g15116 | CX6g045743 | LOC_Os06g37560 | Os06g0573600 | - | Detail |
| C2H6g05809 | 6:19,571,072-19,572,172 | - | C1H6g05998 | CX6g043562 | LOC_Os06g37590 | Os06g0573900 | - | Detail |
| C2H6g00071 | 6:19,580,721-19,586,544 | + | C1H6g01577 | CX6g045069 | LOC_Os06g37610 | Os06g0574100 | - | Detail |
| C2H6g21856 | 6:19,586,987-19,590,813 | - | C1H6g19063 | CX6g042224 | LOC_Os06g37620 | Os06g0574200 | - | Detail |
| C2H6g12198 | 6:19,601,470-19,601,990 | - | C1H6g25361 | CX6g045306 | LOC_Os06g37640 | Os06g0574332 | - | Detail |
| C2H6g29932 | 6:19,610,073-19,618,996 | - | C1H6g25361 | CX6g045306 | LOC_Os06g37640 | Os06g0574400 | - | Detail |
| C2H6g06718 | 6:19,624,312-19,630,198 | + | C1H6g20652 | CX6g043907 | LOC_Os06g37660 | Os06g0574500 | PP2A-1 | Detail |
| C2H6g00455 | 6:19,632,197-19,635,121 | + | C1H6g20194 | CX6g042779 | LOC_Os06g37670 | Os06g0574550 | SDRLK-72 | Detail |
| C2H6g24424 | 6:19,635,391-19,636,514 | - | C1H6g19046 | - | - | - | - | Detail |
| C2H6g09895 | 6:19,640,104-19,642,545 | + | C1H6g16404 | CX6g042779 | LOC_Os06g37690 | Os06g0575000 | MAK8 | Detail |
| C2H6g24656 | 6:19,642,914-19,643,374 | - | C1H6g09541 | - | - | - | - | Detail |
| C2H6g07323 | 6:19,645,372-19,646,164 | + | C1H6g07017 | - | LOC_Os06g37700 | Os06g0575100 | - | Detail |
| C2H6g18814 | 6:19,650,213-19,652,600 | + | C1H6g16404 | CX6g044617 | LOC_Os06g37690 | Os06g0575000 | MAK8 | Detail |
| C2H6g07885 | 6:19,656,108-19,656,515 | + | C1H6g23224 | - | LOC_Os06g37700 | Os06g0575100 | - | Detail |
| C2H6g00626 | 6:19,661,806-19,664,217 | + | C1H6g20035 | CX6g044047 | LOC_Os06g37750 | Os06g0575400 | SDRLK-5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g017789 | 12:2,275,919-2,277,247 | - | - | - | LOC_Os12g05380 | Os12g0149300 | - | Detail |
| CX12g016333 | 12:2,283,677-2,287,937 | + | C1H12g27756 | C2H12g10982 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| CX12g018469 | 12:2,291,867-2,292,927 | + | C1H12g08261 | C2H12g22641 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| CX12g015371 | 12:2,293,630-2,296,990 | - | C1H12g16772 | C2H12g14618 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| CX12g015168 | 12:2,302,408-2,302,960 | - | C1H11g10773 | - | LOC_Os12g05430 | Os12g0150100 | - | Detail |
| CX12g015883 | 12:2,312,398-2,313,927 | - | C1H12g31063 | C2H12g17886 | LOC_Os12g05440 | Os12g0150200 | OsCYP450, CYP94C2b | Detail |
| CX12g016358 | 12:2,338,394-2,339,014 | + | - | - | LOC_Os12g05470 | Os12g0150500 | - | Detail |
| CX12g018115 | 12:2,339,761-2,341,484 | - | C1H12g16085 | C2H12g10067 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| CX12g015648 | 12:2,346,089-2,346,544 | + | - | C2H12g03575 | LOC_Os12g05529 | Os12g0150901 | - | Detail |
| CX12g016582 | 12:2,349,250-2,351,987 | + | C1H12g07376 | C2H12g10170 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| CX12g015247 | 12:2,356,105-2,357,523 | + | - | - | - | - | - | Detail |
| CX12g018081 | 12:2,358,433-2,358,621 | + | - | - | - | Os10g0406701 | - | Detail |
| CX12g016133 | 12:2,359,220-2,359,429 | - | - | - | - | - | - | Detail |
| CX12g016522 | 12:2,361,647-2,361,892 | + | - | - | LOC_Os12g05560 | Os12g0151600 | OsZPR4 | Detail |
| CX12g016301 | 12:2,363,722-2,364,303 | + | - | - | LOC_Os12g05580 | Os12g0151750 | - | Detail |
| CX12g017701 | 12:2,366,158-2,367,116 | - | C1H12g08468 | C2H12g20148 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| CX12g018389 | 12:2,373,053-2,374,847 | + | C1H12g07729 | C2H12g12457 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| CX12g016884 | 12:2,376,673-2,377,932 | - | - | C2H12g03575 | LOC_Os12g05709 | Os12g0153400 | - | Detail |
| CX12g017206 | 12:2,394,775-2,396,937 | - | C1H12g00663 | C2H12g01708 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| CX12g016024 | 12:2,398,230-2,402,402 | - | C1H12g14242 | C2H12g04327 | LOC_Os12g05650 | Os12g0152700 | - | Detail |