| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05595 | 1:2,322,241-2,326,700 | + | C2H1g26068 | CX1g004686 | LOC_Os01g05820 | Os01g0151500 | - | Detail |
| C1H1g02351 | 1:2,330,322-2,330,582 | + | C2H1g26068 | CX1g002082 | LOC_Os01g05820 | Os01g0151400 | - | Detail |
| C1H1g31170 | 1:2,331,403-2,335,866 | + | C2H1g03197 | CX1g003613 | LOC_Os01g05830 | Os01g0151600 | - | Detail |
| C1H1g20436 | 1:2,342,219-2,344,926 | + | C2H1g12467 | CX1g001726 | LOC_Os01g05840 | Os01g0151700 | - | Detail |
| C1H1g08418 | 1:2,347,080-2,348,897 | + | C2H1g28796 | - | LOC_Os01g05860 | Os01g0151900 | - | Detail |
| C1H1g31653 | 1:2,351,695-2,356,767 | + | C2H1g14744 | - | LOC_Os01g05870 | Os01g0152000 | - | Detail |
| C1H1g04326 | 1:2,362,296-2,363,552 | - | C2H1g10532 | - | LOC_Os01g05880 | Os01g0152100 | - | Detail |
| C1H1g18225 | 1:2,366,357-2,366,803 | - | C2H1g27601 | - | LOC_Os01g05890 | Os01g0152200 | - | Detail |
| C1H1g10379 | 1:2,366,945-2,367,607 | - | C2H1g27601 | - | LOC_Os01g05880 | Os01g0152100 | - | Detail |
| C1H1g23535 | 1:2,372,088-2,372,762 | + | C2H1g06791 | - | LOC_Os01g05940 | Os01g0152600 | - | Detail |
| C1H1g23100 | 1:2,372,854-2,375,407 | + | C2H1g06791 | - | LOC_Os01g05940 | Os01g0152600 | - | Detail |
| C1H1g23264 | 1:2,376,899-2,380,706 | + | C2H1g00932 | - | LOC_Os01g05940 | Os01g0152687 | - | Detail |
| C1H1g25728 | 1:2,381,453-2,385,021 | + | C2H2g17047 | - | - | Os03g0578300 | - | Detail |
| C1H1g10783 | 1:2,405,129-2,408,394 | + | C2H1g14033 | - | LOC_Os01g05960 | Os01g0152800 | - | Detail |
| C1H1g00271 | 1:2,409,958-2,410,410 | - | C2H1g18813 | CX1g005739 | LOC_Os01g05610 | Os01g0152700 | - | Detail |
| C1H1g31172 | 1:2,411,331-2,412,383 | - | C2H1g02854 | - | - | - | - | Detail |
| C1H1g24758 | 1:2,411,602-2,414,707 | + | C2H1g14033 | CX1g006643 | LOC_Os01g05960 | Os01g0152800 | - | Detail |
| C1H1g09766 | 1:2,416,668-2,417,129 | - | C2H1g02854 | CX1g005739 | LOC_Os01g05630 | Os01g0152900 | - | Detail |
| C1H1g21562 | 1:2,425,856-2,429,278 | - | C2H1g09733 | - | LOC_Os01g05880 | Os01g0152950 | - | Detail |
| C1H1g26092 | 1:2,429,573-2,430,383 | + | - | - | - | Os01g0152951 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g017789 | 12:2,275,919-2,277,247 | - | - | - | LOC_Os12g05380 | Os12g0149300 | - | Detail |
| CX12g016333 | 12:2,283,677-2,287,937 | + | C1H12g27756 | C2H12g10982 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| CX12g018469 | 12:2,291,867-2,292,927 | + | C1H12g08261 | C2H12g22641 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| CX12g015371 | 12:2,293,630-2,296,990 | - | C1H12g16772 | C2H12g14618 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| CX12g015168 | 12:2,302,408-2,302,960 | - | C1H11g10773 | - | LOC_Os12g05430 | Os12g0150100 | - | Detail |
| CX12g015883 | 12:2,312,398-2,313,927 | - | C1H12g31063 | C2H12g17886 | LOC_Os12g05440 | Os12g0150200 | OsCYP450, CYP94C2b | Detail |
| CX12g016358 | 12:2,338,394-2,339,014 | + | - | - | LOC_Os12g05470 | Os12g0150500 | - | Detail |
| CX12g018115 | 12:2,339,761-2,341,484 | - | C1H12g16085 | C2H12g10067 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| CX12g015648 | 12:2,346,089-2,346,544 | + | - | C2H12g03575 | LOC_Os12g05529 | Os12g0150901 | - | Detail |
| CX12g016582 | 12:2,349,250-2,351,987 | + | C1H12g07376 | C2H12g10170 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| CX12g015247 | 12:2,356,105-2,357,523 | + | - | - | - | - | - | Detail |
| CX12g018081 | 12:2,358,433-2,358,621 | + | - | - | - | Os10g0406701 | - | Detail |
| CX12g016133 | 12:2,359,220-2,359,429 | - | - | - | - | - | - | Detail |
| CX12g016522 | 12:2,361,647-2,361,892 | + | - | - | LOC_Os12g05560 | Os12g0151600 | OsZPR4 | Detail |
| CX12g016301 | 12:2,363,722-2,364,303 | + | - | - | LOC_Os12g05580 | Os12g0151750 | - | Detail |
| CX12g017701 | 12:2,366,158-2,367,116 | - | C1H12g08468 | C2H12g20148 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| CX12g018389 | 12:2,373,053-2,374,847 | + | C1H12g07729 | C2H12g12457 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| CX12g016884 | 12:2,376,673-2,377,932 | - | - | C2H12g03575 | LOC_Os12g05709 | Os12g0153400 | - | Detail |
| CX12g017206 | 12:2,394,775-2,396,937 | - | C1H12g00663 | C2H12g01708 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| CX12g016024 | 12:2,398,230-2,402,402 | - | C1H12g14242 | C2H12g04327 | LOC_Os12g05650 | Os12g0152700 | - | Detail |