| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g12222 | 6:19,178,808-19,182,894 | + | C1H6g06781 | CX6g044842 | LOC_Os06g37000 | Os06g0566100 | - | Detail |
| C2H6g05740 | 6:19,184,459-19,186,897 | + | C1H6g20512 | CX6g045261 | LOC_Os06g37010 | Os06g0566300 | - | Detail |
| C2H6g23857 | 6:19,219,399-19,219,775 | + | - | - | - | - | - | Detail |
| C2H6g25496 | 6:19,224,710-19,226,891 | - | C1H6g02032 | CX6g045076 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g10335 | 6:19,229,811-19,231,228 | + | C1H6g21176 | - | - | Os06g0566700 | - | Detail |
| C2H6g11534 | 6:19,239,649-19,241,535 | + | C1H6g17693 | CX6g041847 | LOC_Os06g37070 | Os06g0567000 | - | Detail |
| C2H6g19087 | 6:19,248,309-19,253,168 | + | C1H6g27275 | CX6g041814 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g01618 | 6:19,276,972-19,280,931 | + | C1H6g21542 | CX6g044886 | LOC_Os06g37150 | Os06g0567900 | AO, OsAAO2 | Detail |
| C2H6g02242 | 6:19,281,094-19,285,497 | - | C1H6g28567 | CX6g042535 | LOC_Os06g37160 | Os06g0568000 | - | Detail |
| C2H6g07187 | 6:19,288,619-19,293,638 | - | C1H6g24215 | CX6g042255 | LOC_Os06g37180 | Os06g0568200 | - | Detail |
| C2H6g09052 | 6:19,324,948-19,333,234 | - | C1H6g14082 | CX6g041824 | LOC_Os06g37224 | Os06g0568600 | OsKOL5, CYP701A9 | Detail |
| C2H6g09927 | 6:19,357,878-19,366,181 | - | C1H6g22956 | CX6g045332 | LOC_Os06g37300 | Os06g0569500 | KO4, OsKO4, OsKOL4, KOS1, CYP701A8, OsKO2 | Detail |
| C2H6g05317 | 6:19,370,801-19,371,202 | + | C1H6g21110 | CX6g043261 | - | - | - | Detail |
| C2H6g02574 | 6:19,387,391-19,395,950 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37330 | Os06g0570566 | - | Detail |
| C2H6g17532 | 6:19,407,243-19,410,630 | - | C1H6g28276 | CX6g045040 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g07805 | 6:19,416,734-19,418,042 | - | C1H6g11014 | - | - | Os06g0570600 | - | Detail |
| C2H6g18371 | 6:19,426,108-19,426,558 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g20521 | 6:19,427,909-19,430,828 | - | C1H6g11014 | CX6g045040 | LOC_Os06g37364 | Os06g0570600 | - | Detail |
| C2H6g06249 | 6:19,449,979-19,453,345 | + | C1H6g06179 | CX6g043330 | LOC_Os06g37410 | Os06g0570900 | - | Detail |
| C2H6g25933 | 6:19,454,136-19,458,316 | - | C1H6g12983 | CX6g041937 | LOC_Os06g37420 | Os06g0571100 | OsHDAC6, HDA706 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018278 | 12:2,108,814-2,110,915 | + | C1H12g05368 | C2H12g10516 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| CX12g018616 | 12:2,111,802-2,114,505 | + | C1H12g27500 | C2H12g04534 | LOC_Os11g05100 | Os12g0145632 | - | Detail |
| CX12g018156 | 12:2,115,357-2,119,235 | - | C1H12g17220 | C2H12g14726 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| CX12g015785 | 12:2,121,060-2,123,690 | - | C1H12g13628 | C2H12g30566 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| CX12g018581 | 12:2,129,378-2,129,551 | - | - | - | - | Os12g0261250 | - | Detail |
| CX12g018716 | 12:2,135,100-2,135,913 | - | C1H12g01108 | C2H12g15061 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| CX12g018292 | 12:2,137,722-2,138,093 | - | C1H12g25187 | C2H12g20480 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| CX12g018510 | 12:2,138,419-2,139,459 | - | C1H12g25187 | C2H12g20480 | LOC_Os12g05180 | - | - | Detail |
| CX12g016051 | 12:2,155,804-2,159,086 | + | C1H12g12080 | C2H12g30172 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| CX12g016274 | 12:2,165,820-2,166,236 | + | C1H11g20827 | - | LOC_Os12g05210 | Os12g0147200 | OsSMP1 | Detail |
| CX12g017200 | 12:2,167,054-2,169,656 | + | C1H12g00004 | C2H12g07258 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| CX12g018143 | 12:2,197,602-2,198,038 | + | C1H12g27513 | C2H12g29923 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| CX12g017854 | 12:2,203,091-2,203,318 | - | - | - | - | - | - | Detail |
| CX12g018651 | 12:2,217,382-2,217,786 | - | - | - | - | - | - | Detail |
| CX12g018093 | 12:2,219,246-2,219,497 | + | - | - | - | - | - | Detail |
| CX12g015934 | 12:2,223,362-2,235,007 | - | C1H12g14632 | C2H12g11473 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| CX12g016883 | 12:2,241,982-2,247,097 | + | C1H12g24063 | C2H12g12632 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| CX12g015209 | 12:2,248,160-2,249,781 | - | C1H12g15447 | C2H12g01567 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| CX12g016510 | 12:2,263,102-2,264,070 | + | C1H12g30747 | C2H12g09179 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| CX12g017610 | 12:2,269,824-2,272,200 | - | C1H12g27311 | C2H12g13534 | LOC_Os12g05370 | Os12g0149100 | - | Detail |