| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g25885 | 2:511,212-511,736 | + | C2H2g09423 | CX2g023145 | - | Os02g0144300 | - | Detail |
| C1H2g28737 | 2:512,219-528,456 | - | C2H2g11436 | CX2g020170 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| C1H2g23635 | 2:534,022-539,607 | + | C2H2g03291 | - | - | - | - | Detail |
| C1H2g03642 | 2:542,529-550,508 | + | C2H2g28219 | CX2g024805 | LOC_Os02g02110 | - | - | Detail |
| C1H2g03397 | 2:547,047-550,223 | - | C2H2g25923 | CX2g023278 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| C1H2g11275 | 2:551,548-553,597 | + | C2H2g00106 | CX2g022213 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| C1H2g19068 | 2:557,087-560,215 | - | C2H2g09655 | CX2g021036 | LOC_Os02g02140 | Os02g0111800 | - | Detail |
| C1H2g08619 | 2:566,450-569,233 | + | C2H2g07259 | CX2g020132 | LOC_Os02g02150 | Os02g0111900 | - | Detail |
| C1H2g30533 | 2:570,769-571,595 | - | C2H2g15382 | CX2g024174 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| C1H2g03728 | 2:574,795-576,396 | + | - | CX2g024535 | LOC_Os02g02190 | Os02g0112600 | NRT2.2, OsNRT2.2, OsNRT2.1 | Detail |
| C1H2g31025 | 2:586,167-587,768 | - | - | CX2g024535 | LOC_Os02g02190 | Os02g0112100 | NRT2.1, OsNRT2.1, OsNRT2.2 | Detail |
| C1H2g07735 | 2:591,979-603,893 | - | C2H2g17743 | CX2g019924 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |
| C1H2g27463 | 2:619,875-623,681 | + | C2H2g20495 | CX2g023815 | LOC_Os02g02230 | Os02g0113200 | - | Detail |
| C1H2g00775 | 2:625,195-626,864 | + | C2H2g03042 | CX2g022139 | LOC_Os02g02270 | Os02g0113800 | - | Detail |
| C1H2g15227 | 2:627,487-628,048 | + | C2H2g10635 | - | - | - | - | Detail |
| C1H2g19532 | 2:628,835-639,667 | - | C2H2g25057 | CX2g019365 | LOC_Os02g02290 | Os02g0114000 | OsBRM | Detail |
| C1H2g15650 | 2:643,748-645,076 | - | C2H2g11144 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g07896 | 2:645,154-645,375 | - | C2H2g30135 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g30436 | 2:648,161-652,853 | - | C2H2g25462 | CX2g024695 | LOC_Os02g02320 | Os02g0114200 | - | Detail |
| C1H2g22369 | 2:655,775-656,005 | + | - | CX2g023221 | LOC_Os02g02330 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018278 | 12:2,108,814-2,110,915 | + | C1H12g05368 | C2H12g10516 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| CX12g018616 | 12:2,111,802-2,114,505 | + | C1H12g27500 | C2H12g04534 | LOC_Os11g05100 | Os12g0145632 | - | Detail |
| CX12g018156 | 12:2,115,357-2,119,235 | - | C1H12g17220 | C2H12g14726 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| CX12g015785 | 12:2,121,060-2,123,690 | - | C1H12g13628 | C2H12g30566 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| CX12g018581 | 12:2,129,378-2,129,551 | - | - | - | - | Os12g0261250 | - | Detail |
| CX12g018716 | 12:2,135,100-2,135,913 | - | C1H12g01108 | C2H12g15061 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| CX12g018292 | 12:2,137,722-2,138,093 | - | C1H12g25187 | C2H12g20480 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| CX12g018510 | 12:2,138,419-2,139,459 | - | C1H12g25187 | C2H12g20480 | LOC_Os12g05180 | - | - | Detail |
| CX12g016051 | 12:2,155,804-2,159,086 | + | C1H12g12080 | C2H12g30172 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| CX12g016274 | 12:2,165,820-2,166,236 | + | C1H11g20827 | - | LOC_Os12g05210 | Os12g0147200 | OsSMP1 | Detail |
| CX12g017200 | 12:2,167,054-2,169,656 | + | C1H12g00004 | C2H12g07258 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| CX12g018143 | 12:2,197,602-2,198,038 | + | C1H12g27513 | C2H12g29923 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| CX12g017854 | 12:2,203,091-2,203,318 | - | - | - | - | - | - | Detail |
| CX12g018651 | 12:2,217,382-2,217,786 | - | - | - | - | - | - | Detail |
| CX12g018093 | 12:2,219,246-2,219,497 | + | - | - | - | - | - | Detail |
| CX12g015934 | 12:2,223,362-2,235,007 | - | C1H12g14632 | C2H12g11473 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| CX12g016883 | 12:2,241,982-2,247,097 | + | C1H12g24063 | C2H12g12632 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| CX12g015209 | 12:2,248,160-2,249,781 | - | C1H12g15447 | C2H12g01567 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| CX12g016510 | 12:2,263,102-2,264,070 | + | C1H12g30747 | C2H12g09179 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| CX12g017610 | 12:2,269,824-2,272,200 | - | C1H12g27311 | C2H12g13534 | LOC_Os12g05370 | Os12g0149100 | - | Detail |