| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g27690 | 5:15,136,997-15,141,711 | - | C1H5g31068 | CX5g038850 | LOC_Os05g30990 | Os05g0373500 | - | Detail |
| C2H5g08611 | 5:15,148,017-15,149,620 | + | C1H5g09200 | CX5g039863 | LOC_Os05g31000 | Os05g0373700 | - | Detail |
| C2H5g08322 | 5:15,152,862-15,153,535 | + | - | CX5g037088 | - | - | - | Detail |
| C2H5g03401 | 5:15,156,395-15,160,312 | + | C1H5g04117 | - | - | - | - | Detail |
| C2H5g30069 | 5:15,172,573-15,174,488 | + | C1H5g20196 | CX5g039645 | LOC_Os05g31040 | Os05g0374200 | OsCKX9 | Detail |
| C2H5g03570 | 5:15,182,755-15,193,593 | + | C1H5g11987 | CX5g037517 | LOC_Os05g31056 | Os05g0374600 | - | Detail |
| C2H5g20713 | 5:15,206,795-15,212,652 | - | C1H5g22476 | CX5g039341 | LOC_Os05g31110 | Os05g0375100 | OsHXK10 | Detail |
| C2H5g21390 | 5:15,229,464-15,234,183 | - | C1H5g21966 | CX5g036757 | LOC_Os05g31140 | Os05g0375400 | OsEGL1 | Detail |
| C2H5g07216 | 5:15,250,256-15,253,292 | + | C1H5g26423 | CX5g038239 | LOC_Os05g31160 | Os05g0375600 | - | Detail |
| C2H5g06087 | 5:15,264,778-15,271,729 | - | C1H5g20894 | CX5g039310 | LOC_Os05g31200 | Os05g0376000 | - | Detail |
| C2H5g11462 | 5:15,274,481-15,280,927 | - | C1H5g02831 | CX5g038768 | LOC_Os05g31254 | Os05g0376600 | - | Detail |
| C2H5g10157 | 5:15,282,591-15,283,338 | - | C1H5g06568 | CX5g038571 | LOC_Os05g31280 | Os05g0376800 | - | Detail |
| C2H5g00006 | 5:15,289,492-15,291,656 | - | C1H5g12763 | CX5g040067 | LOC_Os05g31290 | Os05g0377000 | - | Detail |
| C2H5g17233 | 5:15,309,088-15,309,231 | + | C1H5g27622 | - | LOC_Os05g31370 | - | - | Detail |
| C2H5g14904 | 5:15,312,599-15,314,227 | + | C1H5g14584 | CX5g040971 | LOC_Os05g31380 | Os05g0378200 | - | Detail |
| C2H5g05514 | 5:15,362,084-15,364,022 | - | C1H5g26766 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C2H5g07919 | 5:15,370,826-15,375,815 | - | C1H5g21416 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C2H5g27417 | 5:15,376,344-15,381,134 | - | C1H5g03148 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C2H5g25052 | 5:15,391,008-15,392,979 | - | C1H5g20720 | - | - | - | - | Detail |
| C2H5g30556 | 5:15,405,504-15,409,808 | + | C1H5g06063 | CX5g040570 | LOC_Os05g31610 | Os05g0380800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015814 | 12:1,909,966-1,911,990 | + | C1H12g08865 | - | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| CX12g017921 | 12:1,919,143-1,921,786 | - | C1H12g04512 | C2H12g13165 | - | Os12g0141900 | - | Detail |
| CX12g016343 | 12:1,965,863-1,966,261 | + | - | - | - | Os11g0526000 | - | Detail |
| CX12g016356 | 12:1,986,722-1,986,943 | + | C1H12g26347 | C2H11g12348 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| CX12g015488 | 12:1,989,576-1,992,562 | + | C1H12g23605 | C2H12g17505 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| CX12g015950 | 12:1,993,272-1,994,055 | - | C1H11g20406 | - | LOC_Os11g04935 | Os12g0143300 | - | Detail |
| CX12g018267 | 12:1,994,979-1,995,314 | - | C1H12g20952 | C2H12g04572 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| CX12g016016 | 12:1,996,904-2,006,236 | - | C1H12g29028 | C2H12g15233 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| CX12g017195 | 12:2,006,805-2,007,128 | + | C1H12g21714 | C2H12g06061 | LOC_Os12g04650 | Os12g0143750 | - | Detail |
| CX12g017401 | 12:2,015,167-2,015,736 | - | - | - | LOC_Os12g04970 | - | - | Detail |
| CX12g015864 | 12:2,019,369-2,024,445 | - | C1H12g20218 | C2H12g30125 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| CX12g016038 | 12:2,025,907-2,033,161 | + | C1H12g18494 | C2H12g21227 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| CX12g018054 | 12:2,036,375-2,039,347 | + | C1H12g14180 | C2H12g14580 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| CX12g015780 | 12:2,042,261-2,045,948 | + | C1H12g00146 | C2H12g26458 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| CX12g017410 | 12:2,044,086-2,044,295 | - | - | - | - | Os12g0144401 | - | Detail |
| CX12g016324 | 12:2,045,636-2,045,929 | - | - | - | - | Os12g0198800 | - | Detail |
| CX12g018220 | 12:2,060,225-2,062,128 | + | C1H12g05256 | C2H12g10724 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| CX12g018320 | 12:2,063,788-2,063,937 | + | - | - | - | - | - | Detail |
| CX12g015697 | 12:2,088,887-2,092,034 | - | C1H12g22183 | C2H12g16995 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| CX12g015693 | 12:2,102,716-2,106,117 | + | C1H12g30331 | C2H12g10193 | LOC_Os12g05080 | Os12g0145400 | - | Detail |