| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11776 | 4:25,433,671-25,435,470 | - | C1H4g16820 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C2H4g11266 | 4:25,439,551-25,441,167 | - | C1H4g09246 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C2H4g30476 | 4:25,454,543-25,455,145 | - | C1H4g08474 | - | LOC_Os04g49650 | Os04g0585900 | - | Detail |
| C2H4g22317 | 4:25,459,080-25,459,563 | - | C1H4g14819 | - | LOC_Os04g49660 | Os04g0586000 | - | Detail |
| C2H4g15562 | 4:25,470,204-25,470,497 | - | C1H4g30549 | - | LOC_Os04g49670 | Os04g0586100 | - | Detail |
| C2H4g24989 | 4:25,473,648-25,473,968 | - | C1H4g10022 | - | LOC_Os04g49680 | Os04g0586200 | - | Detail |
| C2H4g18410 | 4:25,488,355-25,489,884 | + | C1H4g24641 | CX4g034550 | LOC_Os04g49690 | Os04g0586500 | - | Detail |
| C2H4g01934 | 4:25,493,577-25,494,656 | + | C1H4g23703 | CX4g033100 | LOC_Os04g49700 | Os04g0586700 | - | Detail |
| C2H4g07006 | 4:25,498,695-25,499,261 | + | - | CX4g036093 | LOC_Os04g49720 | Os04g0587100 | OsINVINH3 | Detail |
| C2H4g20832 | 4:25,500,676-25,501,236 | + | - | CX4g036093 | LOC_Os04g49730 | Os04g0587200 | OsPMEI20 | Detail |
| C2H4g02957 | 4:25,503,576-25,507,184 | + | C1H4g07526 | CX4g035244 | LOC_Os04g49739 | Os04g0587300 | - | Detail |
| C2H4g30591 | 4:25,509,655-25,512,306 | + | C1H4g28454 | CX4g035249 | LOC_Os04g49757 | Os04g0587500 | - | Detail |
| C2H4g11072 | 4:25,517,585-25,518,430 | - | - | CX4g034789 | LOC_Os04g49850 | Os04g0588000 | - | Detail |
| C2H4g10754 | 4:25,521,440-25,531,640 | + | C1H4g11735 | CX4g034668 | LOC_Os04g49860 | Os04g0588200 | OsDNA2_1 | Detail |
| C2H4g21457 | 4:25,532,796-25,534,466 | + | C1H4g26119 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C2H4g16752 | 4:25,544,587-25,552,061 | + | C1H4g17218 | CX4g033335 | LOC_Os04g49890 | Os04g0588700 | - | Detail |
| C2H4g03312 | 4:25,555,113-25,561,966 | + | C1H4g26451 | CX4g033761 | LOC_Os04g49900 | Os04g0588700 | - | Detail |
| C2H4g21025 | 4:25,582,957-25,584,895 | + | C1H4g17761 | CX4g035587 | LOC_Os04g49940 | Os04g0589200 | - | Detail |
| C2H4g11578 | 4:25,612,721-25,613,421 | + | C1H4g24594 | CX4g031423 | - | - | - | Detail |
| C2H4g03333 | 4:25,638,848-25,641,001 | + | - | CX4g033306 | - | Os04g0589400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015814 | 12:1,909,966-1,911,990 | + | C1H12g08865 | - | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| CX12g017921 | 12:1,919,143-1,921,786 | - | C1H12g04512 | C2H12g13165 | - | Os12g0141900 | - | Detail |
| CX12g016343 | 12:1,965,863-1,966,261 | + | - | - | - | Os11g0526000 | - | Detail |
| CX12g016356 | 12:1,986,722-1,986,943 | + | C1H12g26347 | C2H11g12348 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| CX12g015488 | 12:1,989,576-1,992,562 | + | C1H12g23605 | C2H12g17505 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| CX12g015950 | 12:1,993,272-1,994,055 | - | C1H11g20406 | - | LOC_Os11g04935 | Os12g0143300 | - | Detail |
| CX12g018267 | 12:1,994,979-1,995,314 | - | C1H12g20952 | C2H12g04572 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| CX12g016016 | 12:1,996,904-2,006,236 | - | C1H12g29028 | C2H12g15233 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| CX12g017195 | 12:2,006,805-2,007,128 | + | C1H12g21714 | C2H12g06061 | LOC_Os12g04650 | Os12g0143750 | - | Detail |
| CX12g017401 | 12:2,015,167-2,015,736 | - | - | - | LOC_Os12g04970 | - | - | Detail |
| CX12g015864 | 12:2,019,369-2,024,445 | - | C1H12g20218 | C2H12g30125 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| CX12g016038 | 12:2,025,907-2,033,161 | + | C1H12g18494 | C2H12g21227 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| CX12g018054 | 12:2,036,375-2,039,347 | + | C1H12g14180 | C2H12g14580 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| CX12g015780 | 12:2,042,261-2,045,948 | + | C1H12g00146 | C2H12g26458 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| CX12g017410 | 12:2,044,086-2,044,295 | - | - | - | - | Os12g0144401 | - | Detail |
| CX12g016324 | 12:2,045,636-2,045,929 | - | - | - | - | Os12g0198800 | - | Detail |
| CX12g018220 | 12:2,060,225-2,062,128 | + | C1H12g05256 | C2H12g10724 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| CX12g018320 | 12:2,063,788-2,063,937 | + | - | - | - | - | - | Detail |
| CX12g015697 | 12:2,088,887-2,092,034 | - | C1H12g22183 | C2H12g16995 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| CX12g015693 | 12:2,102,716-2,106,117 | + | C1H12g30331 | C2H12g10193 | LOC_Os12g05080 | Os12g0145400 | - | Detail |