| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17454 | 4:9,046,141-9,046,842 | + | C1H4g21617 | CX4g036140 | LOC_Os04g18090 | Os04g0253000 | OsHis1.1 | Detail |
| C2H4g18818 | 4:9,136,552-9,139,814 | + | C1H4g08510 | CX4g035863 | LOC_Os04g18200 | Os04g0254000 | - | Detail |
| C2H4g21534 | 4:9,621,306-9,622,501 | - | - | - | - | - | - | Detail |
| C2H4g29825 | 4:9,695,986-9,707,574 | - | C1H4g31855 | CX4g035037 | LOC_Os04g19684 | Os04g0266400 | - | Detail |
| C2H4g12107 | 4:9,708,142-9,708,411 | - | C1H4g19173 | CX4g032792 | - | Os04g0508800 | - | Detail |
| C2H4g27229 | 4:9,708,460-9,708,768 | - | C1H4g23732 | CX4g032661 | LOC_Os04g19700 | Os04g0266700 | - | Detail |
| C2H4g28498 | 4:9,752,774-9,758,749 | + | C1H4g14102 | CX4g031869 | LOC_Os04g19740 | Os04g0266900 | - | Detail |
| C2H4g24722 | 4:9,859,006-9,860,434 | + | C1H4g18182 | CX4g034751 | LOC_Os04g20070 | Os04g0269100 | - | Detail |
| C2H4g29933 | 4:9,861,375-9,862,390 | + | C1H4g18182 | CX4g034751 | LOC_Os04g22730 | Os04g0376300 | OsPLS4 | Detail |
| C2H4g18468 | 4:9,920,911-9,928,580 | + | C1H4g10534 | CX4g032631 | LOC_Os04g20164 | Os04g0269600 | - | Detail |
| C2H4g15448 | 4:9,934,483-9,935,678 | + | C1H4g17577 | CX4g035708 | LOC_Os09g03490 | Os04g0269700 | - | Detail |
| C2H4g06098 | 4:9,945,207-9,958,133 | + | C1H4g20799 | CX4g035940 | LOC_Os04g20220 | Os04g0270100 | - | Detail |
| C2H4g09540 | 4:9,961,554-9,964,844 | - | C1H4g05159 | CX4g032998 | LOC_Os04g20230 | Os04g0270200 | - | Detail |
| C2H4g16551 | 4:10,021,509-10,034,645 | - | C1H4g20618 | CX4g035775 | LOC_Os04g20270 | Os04g0271000 | - | Detail |
| C2H4g11411 | 4:10,045,115-10,048,730 | + | C1H4g05138 | CX4g035052 | LOC_Os04g20280 | Os04g0271200 | - | Detail |
| C2H4g15311 | 4:10,106,893-10,108,646 | - | C1H4g16428 | CX4g033602 | - | - | - | Detail |
| C2H4g29996 | 4:10,149,595-10,151,744 | + | C1H4g08366 | CX4g031564 | LOC_Os04g20510 | Os04g0273100 | - | Detail |
| C2H4g17258 | 4:10,175,347-10,180,229 | - | C1H4g21420 | CX4g033803 | LOC_Os04g20560 | Os04g0273900 | - | Detail |
| C2H4g05451 | 4:10,194,932-10,197,956 | - | C1H4g18833 | CX4g035160 | - | Os04g0274250 | - | Detail |
| C2H4g11645 | 4:10,200,694-10,205,262 | - | C1H4g19581 | CX4g035547 | LOC_Os04g20590 | Os04g0274400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015814 | 12:1,909,966-1,911,990 | + | C1H12g08865 | - | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| CX12g017921 | 12:1,919,143-1,921,786 | - | C1H12g04512 | C2H12g13165 | - | Os12g0141900 | - | Detail |
| CX12g016343 | 12:1,965,863-1,966,261 | + | - | - | - | Os11g0526000 | - | Detail |
| CX12g016356 | 12:1,986,722-1,986,943 | + | C1H12g26347 | C2H11g12348 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| CX12g015488 | 12:1,989,576-1,992,562 | + | C1H12g23605 | C2H12g17505 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| CX12g015950 | 12:1,993,272-1,994,055 | - | C1H11g20406 | - | LOC_Os11g04935 | Os12g0143300 | - | Detail |
| CX12g018267 | 12:1,994,979-1,995,314 | - | C1H12g20952 | C2H12g04572 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| CX12g016016 | 12:1,996,904-2,006,236 | - | C1H12g29028 | C2H12g15233 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| CX12g017195 | 12:2,006,805-2,007,128 | + | C1H12g21714 | C2H12g06061 | LOC_Os12g04650 | Os12g0143750 | - | Detail |
| CX12g017401 | 12:2,015,167-2,015,736 | - | - | - | LOC_Os12g04970 | - | - | Detail |
| CX12g015864 | 12:2,019,369-2,024,445 | - | C1H12g20218 | C2H12g30125 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| CX12g016038 | 12:2,025,907-2,033,161 | + | C1H12g18494 | C2H12g21227 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| CX12g018054 | 12:2,036,375-2,039,347 | + | C1H12g14180 | C2H12g14580 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| CX12g015780 | 12:2,042,261-2,045,948 | + | C1H12g00146 | C2H12g26458 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| CX12g017410 | 12:2,044,086-2,044,295 | - | - | - | - | Os12g0144401 | - | Detail |
| CX12g016324 | 12:2,045,636-2,045,929 | - | - | - | - | Os12g0198800 | - | Detail |
| CX12g018220 | 12:2,060,225-2,062,128 | + | C1H12g05256 | C2H12g10724 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| CX12g018320 | 12:2,063,788-2,063,937 | + | - | - | - | - | - | Detail |
| CX12g015697 | 12:2,088,887-2,092,034 | - | C1H12g22183 | C2H12g16995 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| CX12g015693 | 12:2,102,716-2,106,117 | + | C1H12g30331 | C2H12g10193 | LOC_Os12g05080 | Os12g0145400 | - | Detail |