| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19272 | 2:27,849,076-27,852,729 | + | C1H2g11463 | CX2g018993 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| C2H2g16186 | 2:27,854,968-27,859,654 | - | C1H2g21451 | CX2g019218 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| C2H2g22569 | 2:27,860,660-27,862,575 | - | C1H2g10424 | CX2g021202 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| C2H2g11855 | 2:27,887,842-27,890,088 | + | C1H2g03384 | CX2g022732 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| C2H2g00897 | 2:27,889,197-27,889,803 | - | - | - | - | Os02g0729801 | - | Detail |
| C2H2g18750 | 2:27,898,773-27,899,249 | + | C1H2g20265 | CX2g022857 | LOC_Os02g49710 | Os02g0178600 | - | Detail |
| C2H2g28980 | 2:27,900,979-27,901,428 | + | C1H2g20265 | CX2g022857 | LOC_Os02g49710 | Os02g0730050 | - | Detail |
| C2H2g24627 | 2:27,901,473-27,905,014 | - | C1H2g00762 | CX2g024291 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| C2H2g28834 | 2:27,906,714-27,910,518 | - | C1H2g11181 | CX2g024916 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| C2H2g02137 | 2:27,921,147-27,925,837 | + | C1H2g01906 | CX2g021108 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| C2H2g29055 | 2:27,929,980-27,934,008 | + | C1H2g17293 | CX2g020148 | LOC_Os02g49770 | Os02g0730400 | - | Detail |
| C2H2g02843 | 2:27,935,151-27,936,552 | - | C1H2g27973 | CX2g021412 | LOC_Os02g49780 | Os02g0730500 | - | Detail |
| C2H2g05336 | 2:27,937,669-27,940,170 | + | C1H2g19216 | CX2g024911 | LOC_Os02g49790 | Os02g0730600 | - | Detail |
| C2H2g23383 | 2:27,940,621-27,944,067 | - | C1H2g31196 | CX2g022531 | LOC_Os02g49800 | Os02g0730700 | - | Detail |
| C2H2g19263 | 2:27,946,330-27,949,427 | + | C1H2g13861 | CX2g023418 | LOC_Os02g49820 | Os02g0730800 | - | Detail |
| C2H2g25104 | 2:27,949,484-27,950,950 | - | C1H2g17305 | CX2g023390 | LOC_Os02g49830 | Os02g0730900 | - | Detail |
| C2H2g21462 | 2:27,962,063-27,968,137 | + | C1H2g08098 | CX2g022148 | LOC_Os02g49840 | Os02g0731200 | OsMADS57 | Detail |
| C2H2g03897 | 2:27,977,657-27,978,175 | + | C1H2g22689 | CX2g020726 | LOC_Os02g49850 | Os02g0731400 | - | Detail |
| C2H2g25341 | 2:27,978,834-27,979,767 | - | C1H2g07036 | CX2g021129 | LOC_Os02g49860 | Os02g0731500 | - | Detail |
| C2H2g19830 | 2:27,981,785-27,982,816 | + | C1H2g04869 | CX2g023460 | LOC_Os02g49870 | Os02g0731600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015814 | 12:1,909,966-1,911,990 | + | C1H12g08865 | - | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| CX12g017921 | 12:1,919,143-1,921,786 | - | C1H12g04512 | C2H12g13165 | - | Os12g0141900 | - | Detail |
| CX12g016343 | 12:1,965,863-1,966,261 | + | - | - | - | Os11g0526000 | - | Detail |
| CX12g016356 | 12:1,986,722-1,986,943 | + | C1H12g26347 | C2H11g12348 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| CX12g015488 | 12:1,989,576-1,992,562 | + | C1H12g23605 | C2H12g17505 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| CX12g015950 | 12:1,993,272-1,994,055 | - | C1H11g20406 | - | LOC_Os11g04935 | Os12g0143300 | - | Detail |
| CX12g018267 | 12:1,994,979-1,995,314 | - | C1H12g20952 | C2H12g04572 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| CX12g016016 | 12:1,996,904-2,006,236 | - | C1H12g29028 | C2H12g15233 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| CX12g017195 | 12:2,006,805-2,007,128 | + | C1H12g21714 | C2H12g06061 | LOC_Os12g04650 | Os12g0143750 | - | Detail |
| CX12g017401 | 12:2,015,167-2,015,736 | - | - | - | LOC_Os12g04970 | - | - | Detail |
| CX12g015864 | 12:2,019,369-2,024,445 | - | C1H12g20218 | C2H12g30125 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| CX12g016038 | 12:2,025,907-2,033,161 | + | C1H12g18494 | C2H12g21227 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| CX12g018054 | 12:2,036,375-2,039,347 | + | C1H12g14180 | C2H12g14580 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| CX12g015780 | 12:2,042,261-2,045,948 | + | C1H12g00146 | C2H12g26458 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| CX12g017410 | 12:2,044,086-2,044,295 | - | - | - | - | Os12g0144401 | - | Detail |
| CX12g016324 | 12:2,045,636-2,045,929 | - | - | - | - | Os12g0198800 | - | Detail |
| CX12g018220 | 12:2,060,225-2,062,128 | + | C1H12g05256 | C2H12g10724 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| CX12g018320 | 12:2,063,788-2,063,937 | + | - | - | - | - | - | Detail |
| CX12g015697 | 12:2,088,887-2,092,034 | - | C1H12g22183 | C2H12g16995 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| CX12g015693 | 12:2,102,716-2,106,117 | + | C1H12g30331 | C2H12g10193 | LOC_Os12g05080 | Os12g0145400 | - | Detail |