| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14909 | 4:25,795,793-25,796,804 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50700 | Os04g0593400 | - | Detail |
| C2H4g15239 | 4:25,799,292-25,800,259 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50710 | Os04g0593500 | - | Detail |
| C2H4g23359 | 4:25,803,475-25,808,257 | + | C1H4g15568 | CX4g035875 | LOC_Os04g50720 | Os04g0593600 | - | Detail |
| C2H4g27782 | 4:25,808,778-25,812,733 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593700 | - | Detail |
| C2H4g24933 | 4:25,813,998-25,815,152 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593800 | - | Detail |
| C2H4g01969 | 4:25,815,562-25,818,187 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50740 | Os04g0593600 | - | Detail |
| C2H4g15923 | 4:25,820,139-25,822,952 | - | C1H4g07130 | CX4g032893 | LOC_Os04g50760 | Os04g0594000 | - | Detail |
| C2H4g20252 | 4:25,826,062-25,827,494 | - | C1H4g24489 | CX4g036141 | LOC_Os04g50770 | Os04g0594100 | OsMYB58/63, RRS1 | Detail |
| C2H4g22220 | 4:25,840,544-25,840,933 | + | C1H4g12774 | CX4g032540 | LOC_Os04g50780 | - | - | Detail |
| C2H4g16603 | 4:25,841,774-25,846,519 | - | C1H4g03547 | CX4g032235 | LOC_Os04g50790 | Os04g0594400 | - | Detail |
| C2H4g10373 | 4:25,847,399-25,848,384 | - | C1H4g04447 | - | LOC_Os04g50810 | - | - | Detail |
| C2H4g30113 | 4:25,858,810-25,860,341 | - | C1H4g04447 | CX4g035659 | LOC_Os04g50800 | Os04g0594500 | - | Detail |
| C2H4g08190 | 4:25,861,172-25,861,957 | + | C1H4g17088 | CX4g036126 | LOC_Os04g40470 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g20855 | 4:25,864,567-25,867,327 | + | C1H4g28401 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C2H4g08661 | 4:25,867,878-25,870,782 | + | C1H4g12708 | CX4g031962 | LOC_Os04g50850 | Os04g0596200 | - | Detail |
| C2H4g13854 | 4:25,870,878-25,873,699 | - | C1H4g13631 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C2H4g30104 | 4:25,874,640-25,876,517 | - | C1H4g13351 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C2H4g29365 | 4:25,878,213-25,883,227 | - | C1H4g21153 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C2H4g17490 | 4:25,890,490-25,892,055 | - | C1H4g02289 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C2H4g16834 | 4:25,893,251-25,896,980 | - | C1H4g20724 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018440 | 12:1,797,021-1,799,237 | + | C1H12g23746 | C2H11g05956 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| CX12g017687 | 12:1,799,742-1,802,258 | - | C1H12g15530 | C2H12g06221 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| CX12g016258 | 12:1,804,217-1,808,266 | - | C1H12g28135 | C2H12g02892 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| CX12g015746 | 12:1,809,504-1,810,592 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g04530 | Os12g0139700 | - | Detail |
| CX12g018085 | 12:1,812,649-1,813,839 | - | C1H12g25083 | C2H12g30338 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| CX12g018203 | 12:1,814,783-1,815,223 | + | C1H12g17838 | C2H12g08204 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| CX12g016311 | 12:1,825,435-1,826,034 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| CX12g015881 | 12:1,827,866-1,833,350 | - | C1H12g21714 | C2H12g11565 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| CX12g017939 | 12:1,836,369-1,838,636 | - | C1H12g21714 | C2H12g27898 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| CX12g015460 | 12:1,844,807-1,845,297 | - | - | - | - | - | - | Detail |
| CX12g018621 | 12:1,848,043-1,848,558 | + | C1H12g31125 | C2H12g06061 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| CX12g016083 | 12:1,851,844-1,852,437 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04660 | Os12g0140700 | - | Detail |
| CX12g016542 | 12:1,855,564-1,855,719 | + | - | - | - | - | - | Detail |
| CX12g016690 | 12:1,862,895-1,865,534 | + | C1H11g19129 | C2H11g27777 | LOC_Os12g04690 | Os12g0141000 | - | Detail |
| CX12g016459 | 12:1,866,312-1,869,875 | - | C1H12g27391 | C2H12g11552 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| CX12g017998 | 12:1,885,086-1,885,298 | - | - | - | - | - | - | Detail |
| CX12g018041 | 12:1,885,853-1,886,632 | - | C1H12g26478 | C2H12g27853 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| CX12g017803 | 12:1,894,477-1,895,223 | - | C1H12g21661 | C2H12g26074 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| CX12g016601 | 12:1,897,378-1,897,602 | - | - | - | - | - | - | Detail |
| CX12g017719 | 12:1,898,432-1,904,169 | - | C1H12g30941 | C2H12g09406 | LOC_Os12g04750 | Os12g0141600 | - | Detail |