| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08449 | 3:22,827,032-22,831,992 | - | C1H3g28158 | CX3g025757 | LOC_Os03g43990 | Os03g0767600 | - | Detail |
| C2H3g00183 | 3:22,850,989-22,852,408 | + | C1H3g19477 | CX3g030013 | LOC_Os03g44000 | Os03g0641500 | - | Detail |
| C2H3g23644 | 3:22,857,611-22,860,492 | + | C1H3g24950 | CX3g028634 | LOC_Os03g44010 | Os03g0641700 | - | Detail |
| C2H3g07109 | 3:22,889,008-22,890,955 | - | C1H3g01904 | CX3g026785 | LOC_Os03g52310 | Os03g0563400 | - | Detail |
| C2H3g21207 | 3:22,891,042-22,892,295 | - | C1H3g20730 | CX3g027695 | LOC_Os03g60730 | Os03g0563400 | - | Detail |
| C2H3g10008 | 3:22,892,305-22,893,259 | - | C1H3g06671 | - | - | Os03g0264950 | - | Detail |
| C2H3g18503 | 3:22,894,081-22,894,476 | - | C1H3g27594 | - | - | - | - | Detail |
| C2H3g26081 | 3:22,895,939-22,901,180 | - | C1H3g09156 | CX3g026196 | LOC_Os03g44050 | Os03g0642600 | - | Detail |
| C2H3g02709 | 3:22,904,886-22,908,692 | - | C1H3g16503 | - | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C2H3g02627 | 3:22,912,590-22,913,452 | - | C1H3g13161 | - | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C2H3g06223 | 3:22,914,427-22,917,808 | - | C1H3g14328 | - | LOC_Os03g44140 | Os03g0642900 | - | Detail |
| C2H3g22187 | 3:22,920,643-22,922,142 | - | C1H3g14328 | CX3g025236 | LOC_Os03g44140 | Os03g0642600 | - | Detail |
| C2H3g18670 | 3:22,927,303-22,931,403 | - | C1H3g14328 | - | LOC_Os03g44140 | Os03g0643250 | - | Detail |
| C2H3g09910 | 3:22,932,863-22,936,714 | - | C1H3g15657 | CX3g026745 | LOC_Os03g44150 | Os03g0643300 | OsOAT | Detail |
| C2H3g18518 | 3:22,943,140-22,948,525 | + | C1H3g26318 | CX3g026309 | LOC_Os03g44200 | Os03g0644000 | ATG6B, OsATG6b, OsATG6c | Detail |
| C2H3g26037 | 3:22,948,656-22,953,503 | - | C1H3g21507 | CX3g028043 | LOC_Os03g44210 | Os03g0644200 | WAL3 | Detail |
| C2H3g15139 | 3:22,961,489-22,965,453 | - | C1H3g30497 | CX3g027891 | LOC_Os03g44230 | Os03g0644400 | - | Detail |
| C2H3g16289 | 3:22,969,858-22,970,233 | + | - | - | - | - | - | Detail |
| C2H3g27117 | 3:22,992,449-22,993,995 | + | C1H3g27278 | CX3g031229 | LOC_Os03g44260 | Os03g0644700 | - | Detail |
| C2H3g12166 | 3:23,000,746-23,003,472 | + | C1H3g27224 | CX3g025553 | LOC_Os03g44290 | Os03g0645000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018440 | 12:1,797,021-1,799,237 | + | C1H12g23746 | C2H11g05956 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| CX12g017687 | 12:1,799,742-1,802,258 | - | C1H12g15530 | C2H12g06221 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| CX12g016258 | 12:1,804,217-1,808,266 | - | C1H12g28135 | C2H12g02892 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| CX12g015746 | 12:1,809,504-1,810,592 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g04530 | Os12g0139700 | - | Detail |
| CX12g018085 | 12:1,812,649-1,813,839 | - | C1H12g25083 | C2H12g30338 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| CX12g018203 | 12:1,814,783-1,815,223 | + | C1H12g17838 | C2H12g08204 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| CX12g016311 | 12:1,825,435-1,826,034 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| CX12g015881 | 12:1,827,866-1,833,350 | - | C1H12g21714 | C2H12g11565 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| CX12g017939 | 12:1,836,369-1,838,636 | - | C1H12g21714 | C2H12g27898 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| CX12g015460 | 12:1,844,807-1,845,297 | - | - | - | - | - | - | Detail |
| CX12g018621 | 12:1,848,043-1,848,558 | + | C1H12g31125 | C2H12g06061 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| CX12g016083 | 12:1,851,844-1,852,437 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04660 | Os12g0140700 | - | Detail |
| CX12g016542 | 12:1,855,564-1,855,719 | + | - | - | - | - | - | Detail |
| CX12g016690 | 12:1,862,895-1,865,534 | + | C1H11g19129 | C2H11g27777 | LOC_Os12g04690 | Os12g0141000 | - | Detail |
| CX12g016459 | 12:1,866,312-1,869,875 | - | C1H12g27391 | C2H12g11552 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| CX12g017998 | 12:1,885,086-1,885,298 | - | - | - | - | - | - | Detail |
| CX12g018041 | 12:1,885,853-1,886,632 | - | C1H12g26478 | C2H12g27853 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| CX12g017803 | 12:1,894,477-1,895,223 | - | C1H12g21661 | C2H12g26074 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| CX12g016601 | 12:1,897,378-1,897,602 | - | - | - | - | - | - | Detail |
| CX12g017719 | 12:1,898,432-1,904,169 | - | C1H12g30941 | C2H12g09406 | LOC_Os12g04750 | Os12g0141600 | - | Detail |