| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05303 | 1:2,652,627-2,653,436 | - | C1H1g21585 | CX1g002516 | LOC_Os01g06580 | Os01g0159200 | - | Detail |
| C2H1g08729 | 1:2,655,546-2,656,988 | - | C1H1g02418 | CX1g003405 | LOC_Os01g06590 | Os01g0159300 | - | Detail |
| C2H1g06991 | 1:2,664,555-2,669,978 | - | C1H1g01252 | CX1g003155 | LOC_Os01g06600 | Os01g0159400 | - | Detail |
| C2H1g28217 | 1:2,673,049-2,673,432 | - | C1H1g21645 | CX1g001170 | LOC_Os01g06630 | Os01g0159600 | OsLEA1a | Detail |
| C2H1g08769 | 1:2,679,190-2,680,349 | + | C1H1g22893 | CX1g001891 | LOC_Os01g06640 | Os01g0159800 | OsbHLH035 | Detail |
| C2H1g08402 | 1:2,682,283-2,685,661 | - | C1H1g13369 | CX1g004847 | LOC_Os01g06660 | Os01g0160100 | - | Detail |
| C2H1g02115 | 1:2,693,538-2,696,603 | + | C1H1g02072 | CX1g004872 | LOC_Os01g06760 | Os01g0160700 | - | Detail |
| C2H1g26663 | 1:2,716,473-2,717,636 | - | - | - | - | Os01g0162001 | - | Detail |
| C2H1g19858 | 1:2,732,902-2,737,578 | + | C1H1g01281 | CX1g005047 | LOC_Os01g06836 | Os01g0162300 | - | Detail |
| C2H1g17754 | 1:2,738,645-2,739,926 | + | C1H1g22094 | CX1g004872 | LOC_Os01g06920 | Os01g0163000 | - | Detail |
| C2H1g18716 | 1:2,748,476-2,751,319 | + | C1H1g25834 | CX1g001373 | LOC_Os01g06760 | Os01g0161000 | - | Detail |
| C2H1g13308 | 1:2,753,733-2,754,559 | + | C1H1g28353 | CX1g004872 | LOC_Os01g06790 | Os01g0161300 | - | Detail |
| C2H1g27758 | 1:2,755,486-2,759,080 | + | C1H1g28353 | CX1g002328 | LOC_Os01g06790 | Os01g0781600 | - | Detail |
| C2H1g15048 | 1:2,759,077-2,759,795 | - | - | - | - | Os01g0161200 | - | Detail |
| C2H1g24385 | 1:2,764,123-2,766,426 | + | C1H1g24738 | CX1g001373 | LOC_Os01g06820 | Os01g0162200 | - | Detail |
| C2H1g16557 | 1:2,767,459-2,770,121 | + | C1H1g01281 | CX1g002328 | LOC_Os01g06836 | Os01g0162300 | - | Detail |
| C2H1g16427 | 1:2,772,743-2,773,407 | + | C1H1g06036 | CX1g001373 | LOC_Os01g06870 | Os01g0162200 | - | Detail |
| C2H1g10540 | 1:2,775,436-2,777,188 | - | - | - | - | - | - | Detail |
| C2H1g22938 | 1:2,783,314-2,784,570 | + | - | - | LOC_Os01g06882 | Os01g0162400 | - | Detail |
| C2H1g07682 | 1:2,784,908-2,788,565 | + | C1H1g04251 | CX1g004872 | LOC_Os01g06920 | Os01g0162500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018440 | 12:1,797,021-1,799,237 | + | C1H12g23746 | C2H11g05956 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| CX12g017687 | 12:1,799,742-1,802,258 | - | C1H12g15530 | C2H12g06221 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| CX12g016258 | 12:1,804,217-1,808,266 | - | C1H12g28135 | C2H12g02892 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| CX12g015746 | 12:1,809,504-1,810,592 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g04530 | Os12g0139700 | - | Detail |
| CX12g018085 | 12:1,812,649-1,813,839 | - | C1H12g25083 | C2H12g30338 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| CX12g018203 | 12:1,814,783-1,815,223 | + | C1H12g17838 | C2H12g08204 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| CX12g016311 | 12:1,825,435-1,826,034 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| CX12g015881 | 12:1,827,866-1,833,350 | - | C1H12g21714 | C2H12g11565 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| CX12g017939 | 12:1,836,369-1,838,636 | - | C1H12g21714 | C2H12g27898 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| CX12g015460 | 12:1,844,807-1,845,297 | - | - | - | - | - | - | Detail |
| CX12g018621 | 12:1,848,043-1,848,558 | + | C1H12g31125 | C2H12g06061 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| CX12g016083 | 12:1,851,844-1,852,437 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04660 | Os12g0140700 | - | Detail |
| CX12g016542 | 12:1,855,564-1,855,719 | + | - | - | - | - | - | Detail |
| CX12g016690 | 12:1,862,895-1,865,534 | + | C1H11g19129 | C2H11g27777 | LOC_Os12g04690 | Os12g0141000 | - | Detail |
| CX12g016459 | 12:1,866,312-1,869,875 | - | C1H12g27391 | C2H12g11552 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| CX12g017998 | 12:1,885,086-1,885,298 | - | - | - | - | - | - | Detail |
| CX12g018041 | 12:1,885,853-1,886,632 | - | C1H12g26478 | C2H12g27853 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| CX12g017803 | 12:1,894,477-1,895,223 | - | C1H12g21661 | C2H12g26074 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| CX12g016601 | 12:1,897,378-1,897,602 | - | - | - | - | - | - | Detail |
| CX12g017719 | 12:1,898,432-1,904,169 | - | C1H12g30941 | C2H12g09406 | LOC_Os12g04750 | Os12g0141600 | - | Detail |