| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25714 | 4:13,753,653-13,759,103 | + | C2H4g04479 | CX4g035158 | LOC_Os04g28300 | Os04g0351333 | - | Detail |
| C1H4g17106 | 4:13,825,456-13,828,668 | - | C2H4g20483 | CX4g035796 | LOC_Os04g28420 | Os04g0352400 | OsFKBP65, OsFKBP62b | Detail |
| C1H4g30599 | 4:13,836,359-13,852,486 | - | C2H4g19395 | CX4g032773 | LOC_Os04g28460 | Os04g0353000 | - | Detail |
| C1H4g12388 | 4:13,866,278-13,873,137 | + | C2H4g27416 | CX4g035108 | LOC_Os04g28520 | Os04g0353600 | OsFAR5 | Detail |
| C1H4g08909 | 4:13,904,537-13,909,640 | + | C2H4g00657 | CX4g035108 | LOC_Os04g28620 | Os04g0354600 | OsFAR3 | Detail |
| C1H4g20993 | 4:13,928,519-13,943,378 | + | C2H4g02790 | CX4g035108 | LOC_Os04g28600 | Os04g0355500 | - | Detail |
| C1H4g05987 | 4:13,956,007-13,956,689 | + | C2H7g26391 | CX4g035114 | - | - | - | Detail |
| C1H4g04495 | 4:13,994,496-14,001,428 | - | C2H4g06544 | CX4g031953 | LOC_Os04g28820 | Os04g0357300 | - | Detail |
| C1H4g11984 | 4:14,009,889-14,010,290 | + | - | - | LOC_Os04g28840 | Os04g0357500 | - | Detail |
| C1H4g03600 | 4:14,021,840-14,031,452 | + | C2H4g15541 | CX4g035284 | LOC_Os04g28870 | Os04g0358000 | - | Detail |
| C1H4g01732 | 4:14,064,371-14,065,931 | + | C2H4g04555 | - | LOC_Os04g28990 | Os04g0359100 | - | Detail |
| C1H4g14057 | 4:14,090,739-14,092,721 | + | C2H4g18096 | - | LOC_Os04g29030 | Os04g0359700 | - | Detail |
| C1H4g23432 | 4:14,122,051-14,127,166 | - | C2H4g27829 | CX4g032592 | LOC_Os04g29090 | Os04g0360500 | - | Detail |
| C1H4g21615 | 4:14,227,393-14,229,190 | - | C2H4g15795 | CX4g034254 | LOC_Os04g29424 | Os04g0363700 | - | Detail |
| C1H4g10002 | 4:14,297,734-14,300,964 | + | C2H4g03810 | CX4g036086 | LOC_Os04g29580 | Os04g0365100 | - | Detail |
| C1H4g11644 | 4:14,399,292-14,402,664 | - | C2H4g05483 | CX4g036156 | LOC_Os04g29680 | Os04g0366000 | - | Detail |
| C1H4g05705 | 4:14,551,000-14,551,860 | - | C2H4g13677 | CX4g035129 | LOC_Os04g29810 | Os04g0367000 | - | Detail |
| C1H4g31313 | 4:14,568,660-14,575,407 | - | C2H4g26507 | CX4g035129 | LOC_Os04g29810 | Os04g0367000 | - | Detail |
| C1H4g30661 | 4:14,604,889-14,606,582 | - | C2H4g13677 | CX4g035129 | LOC_Os04g29810 | Os04g0367000 | - | Detail |
| C1H4g05945 | 4:14,626,156-14,627,534 | + | C2H4g19842 | CX4g036217 | LOC_Os04g29920 | Os04g0367400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018440 | 12:1,797,021-1,799,237 | + | C1H12g23746 | C2H11g05956 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| CX12g017687 | 12:1,799,742-1,802,258 | - | C1H12g15530 | C2H12g06221 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| CX12g016258 | 12:1,804,217-1,808,266 | - | C1H12g28135 | C2H12g02892 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| CX12g015746 | 12:1,809,504-1,810,592 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g04530 | Os12g0139700 | - | Detail |
| CX12g018085 | 12:1,812,649-1,813,839 | - | C1H12g25083 | C2H12g30338 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| CX12g018203 | 12:1,814,783-1,815,223 | + | C1H12g17838 | C2H12g08204 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| CX12g016311 | 12:1,825,435-1,826,034 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| CX12g015881 | 12:1,827,866-1,833,350 | - | C1H12g21714 | C2H12g11565 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| CX12g017939 | 12:1,836,369-1,838,636 | - | C1H12g21714 | C2H12g27898 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| CX12g015460 | 12:1,844,807-1,845,297 | - | - | - | - | - | - | Detail |
| CX12g018621 | 12:1,848,043-1,848,558 | + | C1H12g31125 | C2H12g06061 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| CX12g016083 | 12:1,851,844-1,852,437 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04660 | Os12g0140700 | - | Detail |
| CX12g016542 | 12:1,855,564-1,855,719 | + | - | - | - | - | - | Detail |
| CX12g016690 | 12:1,862,895-1,865,534 | + | C1H11g19129 | C2H11g27777 | LOC_Os12g04690 | Os12g0141000 | - | Detail |
| CX12g016459 | 12:1,866,312-1,869,875 | - | C1H12g27391 | C2H12g11552 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| CX12g017998 | 12:1,885,086-1,885,298 | - | - | - | - | - | - | Detail |
| CX12g018041 | 12:1,885,853-1,886,632 | - | C1H12g26478 | C2H12g27853 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| CX12g017803 | 12:1,894,477-1,895,223 | - | C1H12g21661 | C2H12g26074 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| CX12g016601 | 12:1,897,378-1,897,602 | - | - | - | - | - | - | Detail |
| CX12g017719 | 12:1,898,432-1,904,169 | - | C1H12g30941 | C2H12g09406 | LOC_Os12g04750 | Os12g0141600 | - | Detail |