| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13243 | 1:25,204,245-25,205,597 | + | C2H1g16101 | CX1g000245 | LOC_Os01g49260 | Os01g0686500 | - | Detail |
| C1H1g17217 | 1:25,209,965-25,212,286 | + | C2H1g11919 | CX1g005008 | LOC_Os01g49270 | Os01g0686600 | - | Detail |
| C1H1g23518 | 1:25,212,939-25,214,873 | - | C2H1g06792 | CX1g006716 | LOC_Os01g49280 | Os01g0686700 | - | Detail |
| C1H1g28000 | 1:25,219,332-25,221,680 | + | C2H1g18988 | CX1g000667 | LOC_Os01g49290 | Os01g0686800 | - | Detail |
| C1H1g24973 | 1:25,225,480-25,230,660 | + | C2H1g26696 | CX1g006327 | LOC_Os01g49310 | Os01g0687300 | - | Detail |
| C1H1g17002 | 1:25,235,048-25,235,983 | - | C2H1g29685 | CX1g004166 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| C1H1g24886 | 1:25,239,103-25,240,014 | - | C2H1g15847 | CX1g002308 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| C1H1g25078 | 1:25,245,330-25,249,334 | + | C2H1g12257 | CX1g002582 | LOC_Os01g49330 | Os01g0687500 | - | Detail |
| C1H1g30547 | 1:25,251,784-25,254,003 | - | C2H1g24499 | CX1g004001 | LOC_Os01g49340 | Os01g0687600 | - | Detail |
| C1H1g13249 | 1:25,254,697-25,257,459 | - | C2H1g11352 | CX1g004559 | LOC_Os01g49350 | Os01g0687700 | - | Detail |
| C1H1g18645 | 1:25,259,350-25,262,648 | - | C2H1g17351 | CX1g000658 | LOC_Os01g49360 | Os01g0687800 | - | Detail |
| C1H1g03295 | 1:25,264,251-25,264,802 | - | C2H1g02129 | CX1g006320 | - | - | - | Detail |
| C1H1g06737 | 1:25,266,738-25,269,722 | - | C2H1g03797 | CX1g000285 | LOC_Os01g49380 | Os01g0688200 | - | Detail |
| C1H1g05158 | 1:25,299,574-25,300,336 | - | C2H1g16538 | CX1g004118 | LOC_Os01g49410 | Os01g0688600 | - | Detail |
| C1H1g14442 | 1:25,302,337-25,304,275 | - | C2H1g05242 | CX1g004763 | LOC_Os01g49430 | Os01g0688900 | - | Detail |
| C1H1g07960 | 1:25,308,175-25,309,116 | + | C2H1g18382 | CX1g005316 | LOC_Os01g49440 | Os01g0689000 | - | Detail |
| C1H1g27870 | 1:25,322,708-25,333,831 | - | C2H1g18558 | CX1g000580 | LOC_Os01g49470 | Os01g0689451 | OsHRZ1 | Detail |
| C1H1g26809 | 1:25,342,808-25,345,965 | - | C2H1g12129 | CX1g003352 | LOC_Os01g49490 | Os01g0689600 | - | Detail |
| C1H1g26834 | 1:25,360,265-25,363,213 | + | C2H1g09258 | CX1g005650 | LOC_Os01g49510 | Os01g0689800 | - | Detail |
| C1H1g04543 | 1:25,363,774-25,368,887 | - | C2H1g12314 | CX1g005155 | LOC_Os01g49529 | Os01g0136400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018440 | 12:1,797,021-1,799,237 | + | C1H12g23746 | C2H11g05956 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| CX12g017687 | 12:1,799,742-1,802,258 | - | C1H12g15530 | C2H12g06221 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| CX12g016258 | 12:1,804,217-1,808,266 | - | C1H12g28135 | C2H12g02892 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| CX12g015746 | 12:1,809,504-1,810,592 | + | C1H12g20841 | C2H12g01579 | LOC_Os12g04530 | Os12g0139700 | - | Detail |
| CX12g018085 | 12:1,812,649-1,813,839 | - | C1H12g25083 | C2H12g30338 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| CX12g018203 | 12:1,814,783-1,815,223 | + | C1H12g17838 | C2H12g08204 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| CX12g016311 | 12:1,825,435-1,826,034 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| CX12g015881 | 12:1,827,866-1,833,350 | - | C1H12g21714 | C2H12g11565 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| CX12g017939 | 12:1,836,369-1,838,636 | - | C1H12g21714 | C2H12g27898 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| CX12g015460 | 12:1,844,807-1,845,297 | - | - | - | - | - | - | Detail |
| CX12g018621 | 12:1,848,043-1,848,558 | + | C1H12g31125 | C2H12g06061 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| CX12g016083 | 12:1,851,844-1,852,437 | - | C1H12g21714 | C2H12g20924 | LOC_Os12g04660 | Os12g0140700 | - | Detail |
| CX12g016542 | 12:1,855,564-1,855,719 | + | - | - | - | - | - | Detail |
| CX12g016690 | 12:1,862,895-1,865,534 | + | C1H11g19129 | C2H11g27777 | LOC_Os12g04690 | Os12g0141000 | - | Detail |
| CX12g016459 | 12:1,866,312-1,869,875 | - | C1H12g27391 | C2H12g11552 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| CX12g017998 | 12:1,885,086-1,885,298 | - | - | - | - | - | - | Detail |
| CX12g018041 | 12:1,885,853-1,886,632 | - | C1H12g26478 | C2H12g27853 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| CX12g017803 | 12:1,894,477-1,895,223 | - | C1H12g21661 | C2H12g26074 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| CX12g016601 | 12:1,897,378-1,897,602 | - | - | - | - | - | - | Detail |
| CX12g017719 | 12:1,898,432-1,904,169 | - | C1H12g30941 | C2H12g09406 | LOC_Os12g04750 | Os12g0141600 | - | Detail |