| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06980 | 3:13,044,599-13,045,886 | - | C1H3g22864 | CX3g031122 | LOC_Os03g25840 | Os03g0374900 | - | Detail |
| C2H3g19661 | 3:13,048,962-13,050,659 | - | - | - | LOC_Os03g25850 | Os03g0375200 | - | Detail |
| C2H3g13273 | 3:13,051,135-13,051,977 | - | C1H3g18047 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C2H3g09283 | 3:13,057,833-13,058,834 | - | C1H3g22864 | CX3g031122 | LOC_Os03g25869 | Os03g0375300 | - | Detail |
| C2H3g17665 | 3:13,069,312-13,072,192 | - | C1H3g05274 | CX3g025557 | LOC_Os03g25920 | Os03g0375900 | - | Detail |
| C2H3g22221 | 3:13,077,367-13,080,517 | - | C1H3g13157 | CX3g028356 | LOC_Os03g25930 | Os03g0376000 | - | Detail |
| C2H3g00210 | 3:13,083,588-13,087,167 | - | C1H3g30616 | CX3g030420 | LOC_Os03g25940 | Os03g0376100 | - | Detail |
| C2H3g30664 | 3:13,096,033-13,098,162 | - | C1H3g18959 | CX3g029886 | LOC_Os03g25960 | Os03g0376600 | OsRRM2 | Detail |
| C2H3g14769 | 3:13,100,950-13,105,876 | + | - | CX3g028665 | - | Os03g0173500 | - | Detail |
| C2H3g09272 | 3:13,106,505-13,112,760 | + | - | - | - | - | - | Detail |
| C2H3g23850 | 3:13,113,122-13,117,662 | - | C1H3g09004 | CX3g027038 | LOC_Os03g25970 | Os03g0376800 | - | Detail |
| C2H3g09355 | 3:13,119,025-13,123,798 | + | C1H3g26655 | CX3g029788 | LOC_Os03g25980 | Os03g0376900 | - | Detail |
| C2H3g25053 | 3:13,131,326-13,131,940 | + | C1H3g07493 | CX3g029933 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| C2H3g19573 | 3:13,132,007-13,132,303 | + | C1H3g10607 | CX3g029933 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| C2H3g08354 | 3:13,136,272-13,143,595 | + | C1H3g00737 | CX3g025508 | LOC_Os03g26000 | Os03g0377300 | - | Detail |
| C2H3g12662 | 3:13,147,169-13,156,166 | + | C1H3g02559 | CX3g025508 | LOC_Os03g26030 | Os03g0377500 | - | Detail |
| C2H3g24413 | 3:13,157,621-13,158,373 | + | - | - | - | - | - | Detail |
| C2H3g21234 | 3:13,158,784-13,162,723 | - | C1H3g26368 | CX3g027228 | LOC_Os03g26044 | Os03g0377700 | OsCSLA5 | Detail |
| C2H3g12418 | 3:13,173,149-13,174,558 | + | C1H3g10865 | CX3g028269 | LOC_Os03g26070 | - | - | Detail |
| C2H3g02469 | 3:13,174,994-13,178,761 | + | C1H3g26564 | CX3g030093 | LOC_Os03g26080 | Os03g0378000 | OsAPY2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016027 | 12:1,672,320-1,673,432 | - | C1H11g26745 | C2H11g29740 | LOC_Os12g04230 | Os12g0137000 | - | Detail |
| CX12g015114 | 12:1,676,446-1,676,700 | + | - | - | - | - | - | Detail |
| CX12g016318 | 12:1,677,350-1,680,093 | - | C1H12g30611 | C2H12g16637 | LOC_Os12g04240 | Os12g0137100 | - | Detail |
| CX12g018417 | 12:1,684,367-1,687,895 | + | C1H12g30370 | C2H12g14263 | LOC_Os12g04260 | Os12g0137200 | - | Detail |
| CX12g016382 | 12:1,688,685-1,691,780 | - | C1H12g23515 | C2H12g25110 | LOC_Os12g04270 | Os12g0137300 | - | Detail |
| CX12g015056 | 12:1,699,400-1,703,234 | + | C1H12g19285 | C2H12g13621 | LOC_Os12g04290 | Os12g0137500 | - | Detail |
| CX12g017342 | 12:1,703,901-1,704,899 | - | C1H12g17056 | C2H12g09638 | LOC_Os12g04300 | Os12g0137600 | - | Detail |
| CX12g015660 | 12:1,706,089-1,707,105 | - | C1H12g06551 | C2H12g09638 | LOC_Os12g04320 | Os12g0137700 | - | Detail |
| CX12g016430 | 12:1,712,550-1,713,566 | - | C1H12g06551 | C2H12g02518 | LOC_Os12g04350 | Os12g0137700 | - | Detail |
| CX12g015111 | 12:1,719,848-1,721,694 | - | C1H12g16466 | - | LOC_Os12g05700 | Os12g0597300 | - | Detail |
| CX12g016838 | 12:1,723,761-1,723,952 | - | - | - | - | - | - | Detail |
| CX12g015173 | 12:1,724,261-1,724,470 | + | - | - | - | - | - | Detail |
| CX12g015181 | 12:1,728,299-1,733,790 | - | C1H12g18257 | C2H12g08235 | LOC_Os12g04370 | Os12g0138100 | - | Detail |
| CX12g016946 | 12:1,742,648-1,744,174 | - | C1H12g18257 | C2H12g12918 | LOC_Os12g04380 | Os12g0138200 | - | Detail |
| CX12g017048 | 12:1,748,957-1,751,405 | + | C1H12g03320 | C2H12g06655 | LOC_Os12g04410 | Os12g0138500 | OsBOP3, NH5 | Detail |
| CX12g015145 | 12:1,762,027-1,763,530 | + | C1H12g02118 | C2H12g17026 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g016675 | 12:1,764,949-1,766,614 | + | C1H12g08849 | C2H12g16805 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g018579 | 12:1,767,731-1,773,164 | + | C1H12g04455 | C2H12g26667 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| CX12g018280 | 12:1,779,366-1,780,638 | + | C1H12g26225 | C2H12g06048 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| CX12g016143 | 12:1,789,180-1,792,636 | - | C1H12g06694 | C2H12g06757 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |