| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g25165 | 3:32,885,686-32,887,588 | - | C2H3g20263 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C1H3g04020 | 3:32,888,463-32,894,599 | - | C2H3g22865 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C1H3g13920 | 3:32,895,949-32,901,260 | - | C2H3g23885 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C1H3g00003 | 3:32,917,162-32,920,136 | + | C2H3g18445 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C1H3g05358 | 3:32,921,424-32,923,180 | - | C2H3g22112 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C1H3g18020 | 3:32,925,256-32,926,614 | - | C2H3g14550 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| C1H3g24850 | 3:32,928,738-32,932,739 | + | C2H3g06127 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C1H3g01007 | 3:32,933,006-32,935,436 | - | C2H3g01988 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C1H3g21046 | 3:32,935,712-32,937,240 | + | C2H3g11755 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C1H3g08743 | 3:32,937,686-32,943,657 | - | C2H3g01237 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C1H3g28947 | 3:32,944,618-32,952,053 | + | C2H3g27702 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C1H3g22971 | 3:32,953,532-32,957,757 | + | C2H3g20877 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C1H3g08128 | 3:32,958,528-32,959,671 | + | C2H3g21220 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C1H3g30449 | 3:32,960,840-32,964,567 | - | C2H3g22425 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C1H3g17557 | 3:32,964,924-32,966,813 | + | C2H3g21394 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C1H3g06046 | 3:32,967,135-32,970,461 | + | C2H3g07789 | CX3g027520 | LOC_Os03g62910 | Os03g0846400 | - | Detail |
| C1H3g24479 | 3:32,975,508-32,981,063 | - | C2H3g22805 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C1H3g13171 | 3:32,983,327-32,986,507 | + | C2H3g19054 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C1H3g03440 | 3:32,987,871-32,992,536 | + | C2H3g29284 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C1H3g17919 | 3:32,992,851-32,995,861 | - | C2H3g07021 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016027 | 12:1,672,320-1,673,432 | - | C1H11g26745 | C2H11g29740 | LOC_Os12g04230 | Os12g0137000 | - | Detail |
| CX12g015114 | 12:1,676,446-1,676,700 | + | - | - | - | - | - | Detail |
| CX12g016318 | 12:1,677,350-1,680,093 | - | C1H12g30611 | C2H12g16637 | LOC_Os12g04240 | Os12g0137100 | - | Detail |
| CX12g018417 | 12:1,684,367-1,687,895 | + | C1H12g30370 | C2H12g14263 | LOC_Os12g04260 | Os12g0137200 | - | Detail |
| CX12g016382 | 12:1,688,685-1,691,780 | - | C1H12g23515 | C2H12g25110 | LOC_Os12g04270 | Os12g0137300 | - | Detail |
| CX12g015056 | 12:1,699,400-1,703,234 | + | C1H12g19285 | C2H12g13621 | LOC_Os12g04290 | Os12g0137500 | - | Detail |
| CX12g017342 | 12:1,703,901-1,704,899 | - | C1H12g17056 | C2H12g09638 | LOC_Os12g04300 | Os12g0137600 | - | Detail |
| CX12g015660 | 12:1,706,089-1,707,105 | - | C1H12g06551 | C2H12g09638 | LOC_Os12g04320 | Os12g0137700 | - | Detail |
| CX12g016430 | 12:1,712,550-1,713,566 | - | C1H12g06551 | C2H12g02518 | LOC_Os12g04350 | Os12g0137700 | - | Detail |
| CX12g015111 | 12:1,719,848-1,721,694 | - | C1H12g16466 | - | LOC_Os12g05700 | Os12g0597300 | - | Detail |
| CX12g016838 | 12:1,723,761-1,723,952 | - | - | - | - | - | - | Detail |
| CX12g015173 | 12:1,724,261-1,724,470 | + | - | - | - | - | - | Detail |
| CX12g015181 | 12:1,728,299-1,733,790 | - | C1H12g18257 | C2H12g08235 | LOC_Os12g04370 | Os12g0138100 | - | Detail |
| CX12g016946 | 12:1,742,648-1,744,174 | - | C1H12g18257 | C2H12g12918 | LOC_Os12g04380 | Os12g0138200 | - | Detail |
| CX12g017048 | 12:1,748,957-1,751,405 | + | C1H12g03320 | C2H12g06655 | LOC_Os12g04410 | Os12g0138500 | OsBOP3, NH5 | Detail |
| CX12g015145 | 12:1,762,027-1,763,530 | + | C1H12g02118 | C2H12g17026 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g016675 | 12:1,764,949-1,766,614 | + | C1H12g08849 | C2H12g16805 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g018579 | 12:1,767,731-1,773,164 | + | C1H12g04455 | C2H12g26667 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| CX12g018280 | 12:1,779,366-1,780,638 | + | C1H12g26225 | C2H12g06048 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| CX12g016143 | 12:1,789,180-1,792,636 | - | C1H12g06694 | C2H12g06757 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |